Phalaenopsis equestris: 110018809
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Entry
110018809 CDS
T05601
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
peq
Phalaenopsis equestris
Pathway
peq03440
Homologous recombination
peq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110018809
03450 Non-homologous end-joining
110018809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peq03032
]
110018809
03400 DNA repair and recombination proteins [BR:
peq03400
]
110018809
DNA replication proteins [BR:
peq03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
110018809
DNA repair and recombination proteins [BR:
peq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
110018809
BRCA1-C complex
110018809
NHEJ (non-homologous end-joining)
MRX complex
110018809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcC_Walker_B
Rad50_zn_hook
LPP
Motif
Other DBs
NCBI-GeneID:
110018809
NCBI-ProteinID:
XP_020571905
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MMLELDKVYDGYDVLRSISLRSREVLDCRGPRFVLRDSISQDQEKTESLKIQIKEWERSI
QGVESKILHEENTLKELRKLQEQISTHTTARSTLFKLQQTQYGALAEENEDTDEELKEWQ
TKFEERIAQLQSKISKREREMSDEETKSSLLSQAINDSMREIGKLQAESDAHMSVKREHD
STIQRIFVKCNLGSLPDSPFSFEMGNNLTNKIKTRLFDLEKDLQERKKSNEIELQLLWER
FVTMNARCSEIEGQKKAKIQSKASVSNRIKERESERDLAEQELSSLNLSHIDERERNLQI
EVERKTLALGEKDLESTINQKRTEIFSLEQKIRALYREKDVMASDSEDRVKLDLKKEEVE
NCKRKLKKIMDEHKDKIRSVLKGRLPAEKDLKMEIVNAFGSVKKEYDELNSKTLEAEKDV
KVVQMKIQDARSHLLKLRKEMDAKGRFLESKLHSMIQESDIIDSFPKVLLEAMEKRDVQK
SKYNIADGMRQMFDPFERVARAHHICPCCERPFTPKEEDDFVSKQRVKSASSAEHMKVLG
VESSNADSHFQQLDKLRMIYEEYVKLAKENIPLGEKNLQELMEDLSQKSQAYDDLLGVTA
HVKSDKDGVEILVQPAELFERYFIEIQNLKPQIEDLEYKLDARGQGVKSLEEIQSQLNSL
QSKRDALSSEVESLREEQRFLSDDLSNVQMRWHALREEKLRASGILHKVKKAEEELILLA
EEKAQAEFDEKHFAESLLPLLKDKEKALQEHSNLKSKLDREYEELAETKRSFQQEFEMLL
KLASRIKEYLDSKREEKLKELQDKLLLSESQLQKCESKKQEILADLNKSKELLRNQDQLK
RNIDDNLNYRKTKAEVDELTREIEILEEKVLAVGGISAIEAELKKHLKEKERLLSELNRC
QGTISVYLSNVSKNKHDLKQGQYTDIDKRYFNQLIQLKTTEMANKDLDRYYNALDKALMR
FHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYRVLMQTGDAELEMRG
RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNTESLATALSRIMEDRKGQ
ENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDEHQHSIIEAQMIYD
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgatgttggagcttgataaagtatacgatggctatgatgttctgagatcgataagtttg
agatctcgagaagtattggactgtagaggaccgagatttgtgctccgtgacagcatctct
caagatcaagaaaaaactgaatctctaaaaattcaaattaaggagtgggagaggagtatt
caaggagttgagagtaaaatcctccatgaagaaaacacattaaaagagttgcgtaaactc
caggaacagatatcgacccataccactgctagaagcactttgtttaaacttcaacagact
caatatggtgcccttgctgaggaaaatgaagatacggatgaggagttaaaagaatggcaa
acaaaatttgaagaaaggatagcacagcttcaatctaaaataagtaaacgggagagggag
atgagcgatgaagagaccaaaagttctttgctttcacaggcaatcaatgattctatgcgg
gagatcggaaagctgcaggctgaaagtgatgcacacatgtcagtgaagcgagaacatgat
tcaacgattcaaaggatttttgtgaagtgtaaccttggatcccttccagattctccattc
agctttgagatgggaaacaacctcactaataaaataaagacaaggttgttcgatcttgaa
aaggatttacaggagaggaagaaatctaatgaaatcgaactccaacttttgtgggagcgc
tttgtcacaatgaatgctcgttgtagtgaaattgagggtcaaaagaaagctaagattcaa
tctaaggctagtgtatcaaaccgcatcaaagagagagagagtgagcgtgatcttgcagaa
caagagttgtcaagccttaacctctctcatatagatgaaagggaaagaaacctgcaaata
gaggttgagagaaagaccctggccttgggggagaaagatttagagtctaccataaatcaa
aagagaacagaaatatttagcttggagcaaaaaatcagagctctttaccgtgaaaaagat
gttatggcgagcgattcagaagatcgagtcaagttagatttgaagaaggaagaagtagaa
aattgcaagaggaaactgaaaaaaataatggatgaacataaagataaaattcggagcgtg
ctaaaagggagactgcccgcagaaaaggatctgaagatggagattgttaatgcctttggc
tctgtaaagaaagagtatgatgaactgaactccaaaactcttgaagcagagaaagatgtg
aaagtggtccagatgaaaatacaagatgcaaggagtcatctattgaaacttcgaaaagag
atggatgctaagggaagatttctcgagtccaaactccactccatgattcaggagtctgat
attattgattcctttccgaaagttttacttgaagcaatggagaaaagagatgtgcagaaa
agtaaatacaacattgctgatgggatgagacaaatgtttgatccttttgaaagagttgct
cgtgcccatcatatttgtccatgctgtgagcgacctttcactccaaaggaggaggatgat
tttgttagtaagcaaagagttaaaagtgctagctctgctgagcatatgaaggtattggga
gttgagtcttcaaatgctgactcgcatttccagcaattggacaagctccgtatgatttat
gaagaatacgtaaaacttgcaaaagaaaacatccctttaggggaaaagaatttgcaagag
ttgatggaagatctcagtcagaagtcccaagcttatgatgatctccttggtgttacagct
catgtcaagtctgacaaggatggagtggagattttggtgcaacctgctgaattgtttgaa
agatacttcattgaaattcagaatttaaaacctcaaattgaggatttggagtataaactt
gatgcgcgagggcaaggagtgaaatctctggaggaaattcaatcacagttaaattccttg
cagagcaaaagggatgccttgagttctgaagtagaaagcctgagagaagagcagagattc
ttgagtgatgatttatctaacgtacaaatgaggtggcatgctcttcgagaggagaagcta
cgggcatcaggtatattacataaagtgaaaaaagcagaagaggaattgattctcttagct
gaagaaaaggctcaagctgagtttgatgaaaagcattttgcagaatctcttcttcccttg
ttgaaggataaagagaaggcattgcaggaacattcaaatttgaaatcgaagctggatcga
gaatacgaggaactggcagaaaccaaaagaagttttcaacaggaatttgaaatgcttcta
aaacttgcttctagaatcaaagagtacctggactcaaagagggaagaaaaactaaaggaa
ttgcaggataagcttctcttatccgagtctcagttgcagaaatgtgagagcaagaaacag
gaaattttggcggatttaaacaagagtaaagagttgctcagaaatcaagatcaattaaaa
agaaacatagatgacaacttgaattacagaaaaacaaaagctgaggtggatgaacttact
cgtgagattgagatacttgaggaaaaagttctagctgttggaggaatttctgccattgaa
gctgaacttaaaaaacatctaaaagaaaaggaaaggcttctttcagagctgaatagatgt
caaggtacaatttcagtgtacctaagtaatgtatcgaagaacaagcacgatctcaagcaa
ggacagtacactgacattgacaagcgctacttcaaccaactcattcaacttaagaccact
gaaatggcaaataaggaccttgacagatactacaatgcacttgataaggcactcatgcgg
ttccacaccatgaagatggaggagataaataagatcattagggagctatggcagcagacc
tatcgaggacaggatattgattacataagtatacattctgattctgaaggtgctggaact
cgatcctacagctaccgagtcctcatgcaaactggtgatgcagagttggaaatgcgtgga
aggtgtagtgcgggtcaaaaggttctcgcttcgctgattataagattggcattagcggag
acattttgtcttaattgtggaatacttgcattggatgaacctactactaacttggatggt
ccaaacacagaaagccttgctacagccctctcgagaattatggaagatcgtaaaggacaa
gagaattttcagttgatagttatcactcatgacgaacgttttgctcagctaatcggtcag
cggcaacatgccgagaaatactatcgggttaccaaagatgagcatcagcacagtataatt
gaagcccagatgatatatgattga
DBGET
integrated database retrieval system