Phalaenopsis equestris: 110019176
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Entry
110019176 CDS
T05601
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
KO
K11088
small nuclear ribonucleoprotein D3
Organism
peq
Phalaenopsis equestris
Pathway
peq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110019176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110019176
03041 Spliceosome [BR:
peq03041
]
110019176
03032 DNA replication proteins [BR:
peq03032
]
110019176
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
110019176
Spliceosome [BR:
peq03041
]
Complex A
U1 snRNP components
Sm proteins
110019176
U2 snRNP components
110019176
Complex B
U1 snRNP components
110019176
U4/U6.U5 tri-snRNP components
110019176
Complex C
U2 snRNP components
110019176
DNA replication proteins [BR:
peq03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
110019176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110019176
NCBI-ProteinID:
XP_020572414
LinkDB
All DBs
Position
Unknown
AA seq
131 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIRGKGSSLGVGRGRAVAMRARAQAAGRAA
PGRAAPPPVRR
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggagccttggaattccggtgaagcttctgcacgaggcggccggacacgtggtg
acggtggagcttaagagtggtgagctctacagaggtagcatgatcgagtgcgaagacaat
tggaactgccaactcgaaaacatcacgtacacagccaaggatggcaaagtgtcccaactt
gaacatgttttcatccgaggaagtaaagtaagatttatggtcatacctgatatgctaaag
aatgcgccaatgttcaaacgtttggatgcaagaatcaggggaaaagggtcttctcttggt
gttgggcgtggccgtgcagtcgctatgcgagcaagagctcaagctgctggtagggctgca
cctggtcgagctgcccctcctccggtcaggagataa
DBGET
integrated database retrieval system
