Phalaenopsis equestris: 110019983
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Entry
110019983 CDS
T05601
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
peq
Phalaenopsis equestris
Pathway
peq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110019983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peq03032
]
110019983
03400 DNA repair and recombination proteins [BR:
peq03400
]
110019983
DNA replication proteins [BR:
peq03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110019983
DNA repair and recombination proteins [BR:
peq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110019983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
TopBP1_BRCT0
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
110019983
NCBI-ProteinID:
XP_020573563
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MSLRKGTFSGTNVFLSRNLVPPEVFDAIHDTLRLNGAQVFLCCDPSRTAPNDYHVISSPD
HEKFEDLKAKGCNIVGPQCIFSCAKEHRMLPKHGYTCCLAMDGVKVIASGFERDEKAMIE
KQVTAMGGVLLAKTSMDVNFVIVKNVLAAKYKWALHVLKKPIVNMCWLRQCWIEHRVVPQ
ESYRVLPFMGLTICVTRIPADERKEIESLIVQNGGQYSADLTKKCSHLVSDAPAGDKYVV
AQRWGHIHIVSRKWIDQSISRRACLDERLYPVHEISASVNDARVLRKEPNNEIPQLVQLN
NVEDLEATSSQNISISETDTIKNEVYKGFPGNMEDKHIETNSENMEDQAKFDCRVAQDSE
EDDDLYLSSCRIFLAGFEEKELRKLVDMIRRGGGTRHMLLNEKLSHIILGTPSEAEKKEV
RRLAVWGVINVVNCTWLEESDQAKRELPVSSKHIFPTLMMSKDYTNLCMEPSVVDYGVKK
VENIHVTSFSTTSTVKGDKLSASKLLCNENQETHEACPAIKLKDETKLHYFSATEASSNS
KATFKGKSFCFASSFPAEPRAEVIEWVKGGGGTLLNGQAKNVDFIIESHGLSQVLPANLS
QSTSISTHWIRSSIEEGCMQDVANHILYSPLHCHIPLPGFEGLRFCVSPYDGKERILLRN
LCFVLGAKFTEKLTKKVTHLICKFTNGPKYAAACRKGIQTITADWITECVSQDKLVPTDS
FQPRPVTSQDKEAGLCTVSQHPTQAVQMISFPSQTQSQPQGLMQNSRMNVDSSSDEKRLK
ISELDRNTRASKRHKVVDAPKENCKTGPDVADAIEDLLAQSGKIQDLKPPGMPGHESNIF
AHDAPIIGQNHENSNTASGLSKNCSSRPGKQNNTAHPTNQTRKSGPYETFTETQTDSQVV
GYEEDLSGMQKIIARVRSQGSTLIPDVSEH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaggaagggcacctttagtggtacgaacgtgttcctctctcgaaacctcgtc
ccgccggaggttttcgacgccatccacgacaccctacgactgaacggcgctcaggtcttc
ctctgctgcgatccttcccggacagcccccaacgattaccacgtcatctcttctccagat
cacgagaagtttgaggatcttaaggcaaagggatgcaatattgtaggaccacaatgcatt
ttttcttgtgcgaaagagcacaggatgttgcccaagcatggctatacctgttgccttgca
atggatggagttaaagttattgcttctggatttgagagggatgaaaaggccatgattgaa
aaacaagtcactgctatgggtggggttctgctggccaaaacatcaatggatgtcaacttt
gtcatcgtgaagaatgttttggcagctaagtataagtgggctttacatgttcttaagaaa
cctatcgttaacatgtgctggttgcgccaatgttggattgagcatcgggttgtgcctcaa
gagtcttacagggttcttccttttatgggtttgacaatttgtgttaccagaattcctgca
gatgaacggaaggaaatagaaagtttgatcgtacagaatggtggccagtattctgccgat
cttaccaaaaaatgctcccatcttgtttcagatgctccagctggcgacaagtatgtggtt
gcgcaaagatggggtcacatacatattgttagccgcaaatggatcgatcaatccatttca
agacgagcttgtctggatgagcgtctctatcctgttcatgaaatttctgcttctgttaat
gatgcaagagttttgcgtaaggagcccaacaatgaaatcccacagcttgtccaactaaac
aatgttgaggacctagaagcaacttcatctcagaatatctccatttcagaaaccgatacc
attaaaaatgaggtttataaaggatttcctgggaacatggaagacaaacatattgaaaca
aattctgaaaatatggaagaccaagctaaatttgattgtcgagtagctcaagactcggaa
gaggatgatgatctttatctatcgagttgtagaatttttctggcaggctttgaggagaag
gaattgagaaagctagttgatatgataagaagaggtggaggcactaggcatatgctattg
aatgaaaagttgtcacacataattttaggcactccttcggaggcagaaaagaaagaggta
agacgcttggctgtttggggtgtcattaatgtggttaattgtacttggctcgaggaatct
gatcaagcaaaaagagagcttcctgtatcatctaagcacatatttcccactttaatgatg
tctaaggattatacaaatttatgtatggagccgtctgttgttgattatggcgtcaagaag
gttgaaaacattcatgtcacttctttttcaacaacaagcactgtcaaaggtgataaattg
tctgcatccaagcttttatgcaatgaaaatcaagaaactcatgaggcttgtccagccatt
aaacttaaagatgaaaccaaattgcattatttttctgccacggaggcttcttcaaatagc
aaagcaaccttcaaggggaagtcattctgttttgcaagctcatttcctgcagaacctagg
gctgaagttattgaatgggttaaaggaggaggagggaccttgttgaatggccaagcaaaa
aatgttgatttcatcatcgagtctcatggcctttcacaggttttacctgccaatttatct
cagtctacctccatttccacacattggatacgttcttctatagaggagggctgcatgcaa
gatgttgcgaaccacatactttactcaccattgcattgtcatattccgttgcctggattt
gagggcctccgattttgcgtttccccatatgatgggaaagagaggatattattaaggaac
ttatgcttcgtcttgggagcaaagttcaccgaaaagctaacgaagaaagttacccattta
atttgcaagtttactaatggtccaaaatacgcagctgcttgtagaaaggggattcaaaca
attactgccgattggattactgaatgtgtctcacaggataaattggttccaactgattca
tttcagccaaggcctgtaacttcgcaggataaagaggcaggtttatgtactgtgagtcag
catcctacacaggcggttcaaatgatttccttcccatcacaaacgcagagtcaacctcaa
ggattgatgcaaaactcaagaatgaacgttgattcaagttcagatgaaaaaaggttgaag
atatccgaactggatagaaatactcgtgcatcgaaaagacacaaagtagtagatgctccc
aaggaaaattgcaaaactggccctgatgtggcagatgccatagaagatttgttagctcag
tcaggcaagatccaagacctaaagccacctggaatgcctggtcatgaaagcaatatattt
gcacacgatgctcctatcattggtcaaaatcatgaaaattccaatactgcttctggatta
tcaaaaaattgttcaagccggcctgggaagcaaaacaacactgcccatccaacaaaccaa
acaagaaaatccggcccttatgaaacctttactgaaacacaaacagattcacaggtagtt
ggatatgaggaagacttgtcaggcatgcagaaaataattgcaagagttcgatcacagggc
tcgaccttaatcccagatgttagtgaacattga
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