Phalaenopsis equestris: 110020013
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Entry
110020013 CDS
T05601
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110020013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peq03009
]
110020013
Enzymes [BR:
peq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
110020013
Ribosome biogenesis [BR:
peq03009
]
Eukaryotic type
90S particles
Other 90S particles
110020013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
110020013
NCBI-ProteinID:
XP_020573612
LinkDB
All DBs
Position
Unknown
AA seq
269 aa
AA seq
DB search
MVRAYGIKVPKSLKRKRSDEELGSEGADYRDHAREDEMKNVDLIEDMPSIPIMPPVDESK
KHGVIFILDKAPLEIGKVGNKHQLLNSDEHANFLKKQGKDPSEYRPDIVHQAILAILDSP
LTKAGRLQALYIHSTRNAIIEVKPHVRIPRTFRRFCGLMVQLLEKQKITAVGNREKLLAL
IKNPVTDHLPVNSRKIGLSYSSNKLVHVRDYVAAASDDVNLVFVVGAMAHGVIDKGYIDD
FISVSNYPLSAACCLSRICNALEQKWKIL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtgcttacggaattaaggttccgaagtccctgaagcggaagagatcggatgaa
gagttgggatctgaaggtgcggattacagggatcatgccagggaggatgagatgaaaaat
gtggacttgatcgaagatatgccgtcgatccctatcatgccaccggtggatgagtcaaag
aaacatggtgtgatattcattcttgataaggctccccttgagatcggaaaagttgggaac
aaacatcagcttttgaactctgacgagcatgctaattttctaaaaaagcagggtaaggat
ccttctgaataccgacctgatattgtccatcaggcaattcttgccattttggatagcccc
ttaactaaggctggaaggctgcaagctctatatattcattcaacacgaaatgcaatcatc
gaagtcaaaccacatgttcggattccgcgaactttcaggagattctgtggtcttatggtg
cagttgttagagaagcaaaaaataactgctgtaggcaatcgtgagaagcttcttgctctg
attaagaaccctgtaaccgatcacttacctgttaattcacgaaaaataggcttatcatac
agttctaataaattagtccatgtgcgtgactatgttgctgctgctagtgacgatgtcaat
cttgtctttgtggtgggcgcaatggctcatggagtcattgataaaggatatatagatgac
ttcatatcagtttcaaattaccctctcagtgcagcttgctgcttgagcaggatatgcaat
gcgttggagcagaaatggaagatattgtaa
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