Phalaenopsis equestris: 110020365
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Entry
110020365 CDS
T05601
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
peq
Phalaenopsis equestris
Pathway
peq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110020365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peq04131
]
110020365
Membrane trafficking [BR:
peq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110020365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR5
Beta-prop_EML
TPR_VPS8_2
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_HPS5
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
110020365
NCBI-ProteinID:
XP_020574100
LinkDB
All DBs
Position
Unknown
AA seq
1919 aa
AA seq
DB search
MELDLELFLRSRGGDLSSDSSEEGEPTATHRRTVDEILNDTDSDSSPAPGALPSISHALH
KEIVTIREEELRDGDDADHPSSSFVETLEEPYKWRRAGEVSSFSYLSSLGYASYSNASRS
SSSARQFPSLFTGVRPKPRPGAALAAAAAASRSIPTPHAAAIKSKRSSGGSIQKVLLLED
STGGLDVDASFVSEDLDERDFSLVASSSGRLGGDEDVGVVDSSLTIGSSALSGFDVAADE
LLQGDVVSTEKERSFFVSDGETSENVKEDLSHSLLQFESKEILEDLPSPRSTPAHTHVNV
LEMNDDLLSVKKADANDEHDLTTNEASREIISSEAESFNNSDGKNSSIGEESGTSSEIDS
LVGQLANEVEGTQNAEKKSSTPMKPLDWAEELEKRKASSGLHWEEGAAAQPMRLEGIRRG
PPAVGYLQMDLDNMITRAFSSQTFKHDYGLPHVLAVHMNFIAVGTSKGVVLVFPCKYSPH
YADNMDGKMLTFGSSGEKIPVPVTSMCFNQQGDLLLVGYFDGHLTIWDVQRGTSAKVITG
EHNAPVTHTLFLEQDSQVSRQFKAVTGDSKGLVLLHTSSVFILHHFSIKTQCLLDGQKNS
TVLCACPVVMDNSQDVGSTSSQVYSSVPSSGLGAKVGGVVGADTGWKLFNGNPSIVEEGV
VVLATNQNALVVRLSPTVQVYENLSKPDGVREGSMPYAAWKCMGHSHDSSLDKVAWLAIA
WDKKIQIFRLAKSKIRRHNEWTLDSTAIGVAWLDDQMLVILSIRGQLCLFSRDGAELHQT
NLTVDCSSMDDFIIYHTHYMNTFGNPEKAYHNSVAVRGATIYILGPMHLIISRLLPWKER
IQVLQKAGDWMGALDMAMRLYDGHAHGVIDLPRTVTAIREAIMPYLVELISSYVDEVFSY
ISIAFYNQIDKIGLKEDPSITDSSVRFEIAEQYARVGGVAVEFCVHIKKTDLLFDGIFSK
FVAVQHEGTFLEILEPYILRDMLGCLPPEIMQALVEHYSIKGWLERVEQCVLHMDISSLD
FNQVVRLCREHGLYGALIYLFNKGLNDFKAPLEELLLGLHSSSSIDVASIGYRMLVYLKY
CFQGLAFPPGHGYLPPSRSPSIWKELLEFLLEDSKISLSQVSKKLKSFSGNLPNLFYILY
LDTEAALDVLQCAFNEAEHIKDPSDLGQPASHVDLENKHELEYSKSQYSMVQSIANALIS
IIDLESDIVWFFEMDCNEDVWPLKKDIYFILDFIAYLVASKRATISARVLMHIAEYLTLH
DHSQKDRDSIKERRLLSVLKAVPQEIWDTSFVLPLCMEAKFYQACGFIHYIRGEYVDALD
SYMQDLDEPIHAFSFINKLFLQLDNTKALLFQAAVISRFPELVKLSRECTFFLAIDQLDI
EMQNILSQLHSHPQSLFLFLKTLFDFHISGTLNFPVPETALVANYPNVRMRDSLIDIADY
LEKLSNFPKLLHHDTIQVTDEMAELYLELLCQFERNSVLKFLETFDNYRLEHCLRLCQEY
GVTDAAAFLLERVGDVGSALVVLMSGLDEKIELLVFAVVNKFSDATSRNMSETEQLADAL
KLTEAYAVHDVLRASVGLCQRNTQRLDQQESESLWFRLFDSFSEPLSRFCSCKEAPEGKT
DYGKLIAGSKSFVVTNELLSRYKLSKLKKCDNILKRLFSQFIGEIMEGMAGYVPLSAVML
KFLSDNRNQEFGDFKMTILKMLGSYNYERRILDTAKSLIEDDTFYTMGVLKKGALHALAP
QTLTCCFCGLPLTKVSSSSGIRIFNCGHSIHLHCESGENEHHCTISAVMCPVCQIKKNPK
PRSKAAIAEKGLVNNVISTPRNSSLQHLHETDLIDKSYGLQHISRFDILNNLEKNKSLHM
NILPQLRLAPPAIYHEKVLKGPVSLTREMQDTPPKKEKLAKRRFPLKSSFFGMERNKVR
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgacctcgaattgtttctgcgatcgcgtggtggcgatctctcatcagacagt
agcgaggagggcgagcccactgccacgcatcgccgcaccgtggacgaaatcttgaacgat
accgattcggattcctctcccgctcccggagctctaccctccatctctcatgctctccac
aaagagattgtcacaatccgcgaggaagaactgagagatggagatgatgccgatcacccg
tcatcatcatttgtggaaaccctagaagaaccctacaaatggagaagagcaggggaagtt
tcctccttttcctatctttcttctctggggtatgcgagctactctaatgcttccaggtct
tcttcatccgcccgccagtttccttctttgttcactggcgtaaggccgaagcctaggcct
ggcgcagcactcgcggctgctgcagccgcatccaggtccattccgactcctcatgcggcg
gcgatcaagtctaaaagatcaagcggcggatctattcaaaaggttttgttgcttgaggat
tcgacgggagggctggatgtggacgcaagcttcgtctcggaagatttggatgaacgtgat
ttttccttggtggcctcatcaagtgggcggttgggaggcgatgaggatgttggagtagta
gattcttccttaactatcggttcttctgctttgtcaggctttgatgttgcagcagatgaa
ctgcttcagggcgatgtagtttctactgagaaggagcggtctttttttgttagcgatgga
gaaacatctgagaatgtgaaagaggatttgtcgcattctcttttgcaatttgaatctaag
gaaattctggaggacctgccttcccctaggtcaaccccagcgcacactcatgtgaatgtt
cttgaaatgaatgacgatttactatctgtaaagaaagctgacgccaacgatgaacatgat
cttaccactaatgaggcatcgcgggaaattatatcaagtgaagctgaaagttttaataat
agtgacggaaaaaatagtagcatcggggaagagagcgggacttccagtgaaatagatagt
ctggttggccagttagcgaatgaagtggaaggcacacagaatgcggagaagaaatcttct
acacctatgaagccgttagactgggctgaagagcttgagaagcgaaaggcctcatccggc
ttgcattgggaagagggtgcagctgcacagccaatgaggcttgaaggcattcgcagagga
ccacctgctgttggttatctgcaaatggacctggacaacatgattactcgtgctttttct
tcacaaacgttcaagcatgattatggattgccacatgtattagcagtgcatatgaatttt
atagcagtgggcacatcaaaaggcgttgttcttgtctttccctgcaaatattcccctcat
tatgctgataacatggatggaaagatgctgacatttggttcatctggcgagaaaattcca
gtacctgtgacttctatgtgcttcaatcaacagggtgacctactgctagttggatacttt
gatggccatcttaccatatgggacgtacaaagagggacgtcagctaaagttatcactgga
gagcataatgcaccggtaacacatactttgtttctggagcaagattcacaagtatcacgc
caattcaaagctgtcaccggcgattccaagggtcttgttcttcttcatacttcttcggtg
tttattcttcaccatttctccattaagactcagtgccttctagatggccaaaaaaatagc
actgttctgtgtgcatgccctgttgtgatggataattctcaagatgttggtagcacatct
tctcaagtctattcctcagtcccttccagcggtctaggtgcaaaggttggtggtgtagtt
ggggctgacaccggctggaagctgttcaatggaaacccctccatagttgaagaaggtgtg
gtcgttttggccaccaaccaaaatgctctagtggtaaggcttagtcctactgtccaagtc
tatgaaaatctttctaaaccagatggagtacgggaaggttccatgccttatgcagcctgg
aaatgtatgggccattctcatgattcctctctagataaagttgcatggctagccatagct
tgggataagaaaattcagatattcaggttggccaaatcaaagataagaaggcacaatgag
tggaccctggatagcactgcaataggtgttgcatggttggatgatcagatgttggtgatt
ctttctatccgaggacaactctgcttgttttcaagagatggagcagaacttcatcaaaca
aatcttactgtagattgctctagcatggatgatttcattatatatcatacccactatatg
aatacctttggaaatccagagaaggcttaccataattcagtagctgtaagaggggctaca
atctacatacttggtcccatgcatctcataatttctcgccttctgccatggaaagaacga
attcaggttcttcagaaggcaggtgactggatgggtgcattagatatggcgatgagactt
tatgatggccatgcacatggggtaattgatctccctagaacggtcactgctatccgggag
gccataatgccttatttagttgagctgatctcatcatatgttgatgaagtgttctcttat
atttccatagccttttacaaccaaatagataaaattggcttaaaggaagaccctagcatc
actgatagttctgtgcgctttgagatagcggaacagtatgctcgtgttggcggggttgct
gtagaattttgtgttcacataaaaaagactgacttattatttgatggaatcttctcaaaa
tttgttgctgttcaacatgaaggcacttttttggagattttagagccatatatattaagg
gatatgttaggatgtttgcctcctgagatcatgcaagcgttggtagagcattatagtatc
aaagggtggttagaacgagttgagcaatgcgttcttcacatggacatttcttccttggat
tttaatcaggttgtgaggttatgccgggaacatggattatatggtgcactgatatatctt
ttcaataaaggtttaaatgattttaaagcacctctagaggaactattgttgggcctacat
agtagctctagtattgatgtcgcttctattgggtacagaatgcttgtttatctgaagtat
tgctttcaaggtcttgcatttcctccaggacatggttatcttcctccttctagatcacct
tcaatttggaaagaattgttggaatttttactcgaagattctaaaatttcactctcacaa
gtgtcaaaaaagctcaaatctttttctggaaatttaccaaaccttttctatatcctttac
ttggacaccgaagcagctctggatgttctacagtgtgctttcaatgaagcagaacatatt
aaagatccgtcagatcttggccaaccagcttctcatgtagatctagaaaataaacatgaa
cttgagtattcaaaaagccaatattcaatggtgcaaagtattgcaaatgcactaatatct
attattgacttggaatctgacattgtttggttctttgagatggattgcaatgaagatgtt
tggcctttgaaaaaagacatttattttatactagactttatagcgtaccttgttgcaagt
aaaagagccacaatttctgcgagagtattgatgcatattgctgaatatttgacattacat
gatcacagtcagaaagatagagattctataaaggaaagacggctactttctgttttgaag
gcagtacctcaggaaatttgggatacttcttttgttttgcctctctgcatggaggctaaa
ttctatcaggcatgtggctttattcattacatcagaggggagtatgttgatgccctagat
agctatatgcaggatttggatgagcctatccatgcattttcttttattaacaagttgttc
ttgcaactagacaatacgaaagctttattatttcaagcagcagttatttcccgttttcct
gagctggttaaacttagcagggaatgcacatttttcttagctattgaccaacttgatatt
gagatgcagaatattctttcacagcttcattctcatccacagagcctttttcttttcttg
aagactttgtttgattttcacatatctggcactctcaactttcctgtgcctgaaactgct
cttgtcgcaaattatcctaatgttagaatgagggattcacttattgatattgcagattac
ttggagaaactatcaaatttcccaaagcttttgcatcatgacacaattcaagtgactgat
gagatggcagagctgtatttagagcttttgtgccagttcgaacgaaactctgttcttaag
tttttggagacgtttgataactatagactggagcactgtttgagactctgtcaagagtat
ggtgttacagatgcggctgcatttttgctggaacgagttggtgatgttgggagtgcttta
gtagtcctaatgtctggacttgatgaaaaaattgaattacttgtttttgctgtggtcaat
aaattctctgacgctacttcaagaaatatgtctgagacagagcaacttgctgatgccttg
aaacttacagaggcttatgcagtgcatgatgttttacgtgcctcagttggcttatgccaa
aggaacactcaacgtttggatcaacaagaatcagaatctctttggtttcggttatttgac
tcgttctctgagccacttagcagattctgcagctgcaaggaagctcctgaagggaaaacc
gattatggcaaattgattgctggttccaagtcatttgttgtcaccaatgaattattgtct
cgatacaagctttcaaagcttaagaaatgtgataatattttgaaaagactattttcccaa
tttattggagaaatcatggagggaatggcaggatatgtacccctttccgcagtaatgctt
aagttcctttcagacaatagaaatcaagagtttggtgattttaaaatgacaattctgaaa
atgttgggaagttacaactatgagagaagaatactggatacagccaaatcattaatagaa
gatgacacattctataccatgggcgttctaaaaaagggagctttgcatgctttggcacca
caaactctaacctgctgcttctgcggcttgcctcttacaaaggtatcgtcttcttccggg
attcgaatatttaactgcggacattcgatccatctccactgcgagtccggagaaaacgaa
caccattgcacaatttctgcagttatgtgccctgtttgtcagattaagaaaaacccaaaa
ccaagaagtaaagcagctatcgctgagaaaggattagttaataatgttatctcaacccca
agaaactctagcttgcaacatctgcatgaaactgatttgatagataagtcctatggcctc
cagcacatttctaggtttgatatcttgaacaacctcgagaaaaataagtctctccatatg
aatatcttacctcagttgaggcttgcaccgccggccatttaccatgaaaaagtcctgaag
ggaccagtttctttgacgagggagatgcaagatacaccgccgaagaaggagaagctggct
aaacgccgatttcccttaaaatccagtttctttggaatggagagaaataaagtgcgctaa
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integrated database retrieval system
