Phalaenopsis equestris: 110020473
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Entry
110020473 CDS
T05601
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
peq
Phalaenopsis equestris
Pathway
peq03030
DNA replication
peq03410
Base excision repair
peq03420
Nucleotide excision repair
peq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110020473
03410 Base excision repair
110020473
03420 Nucleotide excision repair
110020473
03430 Mismatch repair
110020473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peq03032
]
110020473
03400 DNA repair and recombination proteins [BR:
peq03400
]
110020473
DNA replication proteins [BR:
peq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110020473
DNA repair and recombination proteins [BR:
peq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110020473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
RCF1-5-like_lid
Rad17
AAA_22
PTCB-BRCT
Gp44_lid
AAA_assoc_2
AAA_30
AAA_19
AAA_5
Zeta_toxin
SPATA24
BRCT_2
NTPase_1
AAA_18
nSTAND3
RNA_helicase
RsgA_GTPase
AAA_14
RuvB_N
SurA_N
Salactin
DNAX_ATPase_lid
Bro-N
Motif
Other DBs
NCBI-GeneID:
110020473
NCBI-ProteinID:
XP_020574247
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MSSDIRKWFMKQHNQGNGGSTKTTAFQKSSQNVSEKVKEDEGNFQRRKTSKYFAAVSDAE
KKSMPMVKDEIAAEEVSSKRKNKKCDDKIQNELKPSPAKRFRKDAAASNDDDDDDFAPSR
EKKKPTDTKPLKNLQSNATRAIKKSVDGDKSDEDDDYDKDAETSVKGGGRGRGGRGSSST
GGRGGRGGRGGFMNFGERKDPPHKGEKEVPEGSPDCLAGLTFVISGTLDSLEREEAEDLI
KRHGGRVTGSVSKKTNFLLADEDIGGRKSEKAKELGTAFLTEDGLFDMINKSKPKKASVR
TDGKSKTPEKKDKLLEKDGRIKQELKGTEPNLGFKKSDAKDVQSSISHQKKKFKAGDSLT
WTEKYRPKVPNDIIGNQSLVKQLHDWLANWHKEFLHSAKKPTGKRQSDSAAKKAILISGS
PGIGKSTSAKLVSQMLGFNVIEVNASDSRGKADSKIAKGVAGSTSNSIKELIGNEALSIN
KNWPKHAKTVLIMDEVDGMSAGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYC
MLLNFRKPTKQQMAKRLMQIAQAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSLSV
IKYDDVRERLLSSAKDEDISPFTAVDKLFDFKGGKLRMDERIDFSMSDPDLVPLIVQENY
INYRPSLAGKDENGVRRMNLIAQAAESIGDGDIVNVQIRRYRQWQLSQAGSFASTIIPAA
LMHGNRETLEPGERNFNRFGGWLGKNSTMGKNLRLLEDVHIHILASQASNLDRQTLRIDY
LPLLLKQLTDPLRVMAKDAAVQNVVEFMNTYSFSQEDLETIMELSKFKGHPNPMDGILPA
VKAALTKAYKQASTTRIVRTADLINLPGIKKAPKKRVAAILEPVENSLAEENDDTLLENE
DGSDAEEADDSISQNGEATPQLDLKTDNRKGIQVQLDLKNEDGMSNSKSASASKARGSAS
SDKGGGRGGSAGGKRKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggatatacgcaaatggttcatgaagcaacacaaccaaggaaatgggggatca
acaaaaactacagcttttcagaaatcttctcagaatgtctccgagaaggtcaaagaagat
gaaggaaatttccaaaggaggaaaacaagcaaatattttgctgctgtttctgatgcagag
aagaagtctatgcctatggtaaaagatgaaattgcagcagaggaggtttcttcaaaaagg
aagaacaaaaaatgtgatgataaaatacagaatgaacttaaaccgtcaccagcaaaaagg
tttcgtaaggatgctgctgcttctaatgatgatgacgacgatgattttgcgccatcccgt
gagaagaaaaagccaactgataccaaacccttaaagaatttgcagagcaatgctactcgg
gcaattaaaaaatcagttgatggtgataaaagtgatgaagacgatgattatgataaagat
gccgagacttctgttaagggtggtggaaggggcagaggtggcagaggatcatcctcaaca
ggtggaagaggaggaagaggtggaagaggcggtttcatgaattttggtgaacgtaaagac
ccgcctcataaaggcgaaaaggaagtacctgaaggctcacctgattgcttagcaggtcta
acatttgtcattagtggcacacttgatagtttagaaagagaagaagcagaagatctcata
aagcgccatggtggtcgtgttacaggatctgtcagcaagaaaacaaattttcttttagct
gatgaagatatcggtggaaggaaatctgagaaagctaaagaactgggcaccgccttccta
actgaggatggactgtttgatatgatcaacaaatcaaaaccaaaaaaggcttctgttcga
actgatggtaaaagtaaaactcctgaaaagaaagataaattgctggaaaaagacggccga
ataaaacaagagttaaaaggcacggagcctaatttggggtttaaaaagagtgatgcaaaa
gatgttcaatcgagtatctctcaccaaaagaaaaagtttaaggctggtgattcgttaacc
tggaccgaaaaataccgtccaaaggttccaaatgatattataggaaatcaatcacttgtt
aaacagcttcatgattggctagctaattggcacaaggagtttcttcattcggcaaaaaag
ccaacaggtaaaagacagagtgatagtgcagccaaaaaagctatattaattagtggatca
cctggcattgggaagagcacttcggccaagctggttagccaaatgcttggttttaatgtt
attgaggtgaatgctagtgatagtcgtgggaaggctgattctaaaattgctaaaggcgtt
gctggaagcacatcaaattccatcaaggaactcattggcaatgaagctttgagcataaac
aagaattggccaaagcatgcaaaaacggtgctaatcatggatgaggttgatggtatgtct
gctggagataggggtggagtggctgatcttattgctagtataaaggtttctaagattcct
ataatttgcatatgtaatgatcggtatagccaaaagttgaagagccttgtcaattactgc
atgctgctcaactttaggaagcccactaaacagcagatggcaaaaaggttaatgcaaatt
gctcaagcagaaggtcttcaggttaacgagattgctctcgaagaacttgctgaaagagtt
aacggagatatgcggatggcattgaatcagttacaatatatgagtctctctctatccgtt
atcaaatatgatgatgttagggaacggcttcttagcagtgcaaaagatgaagacatttca
ccctttacagctgttgacaagttgtttgacttcaaaggaggaaaattacgaatggatgag
aggattgatttcagcatgagcgaccctgacttggtgcctcttattgttcaagaaaactat
ataaattatcgaccatcattggctggaaaggatgagaatggagtcagaagaatgaaccta
attgctcaggctgctgagtcaataggggatggcgacattgttaatgtacaaattagacga
tatcggcaatggcagctttcccaagctggttcatttgcatctactataatcccggctgct
ttaatgcatggaaatcgggaaacattagaacctggagagcgaaatttcaataggtttggt
ggatggctgggaaagaattcaacaatgggaaagaatttaaggcttctggaggatgtccac
attcacatccttgcttctcaggcttctaatttagacaggcaaactctacggattgactac
ttgcctcttcttttaaaacaactgacagatccacttcgagtaatggcaaaggatgcagct
gtgcaaaatgtagttgaattcatgaatacatattcatttagccaggaggatttggagacg
atcatggagctatccaagttcaagggtcatccaaatcccatggatggtattctaccagca
gtcaaagctgccttgactaaggcatataaacaagcaagcaccactcgaattgtgagaacg
gcggacttgatcaaccttccaggtattaagaaggctccaaagaagcgtgttgctgcaatt
ttggaacctgtggagaatagcttggccgaagaaaatgatgatacattgttggaaaatgag
gatggttctgatgctgaagaagctgatgattcgatcagccaaaatggtgaggcaacccct
caactagatctgaaaaccgataatcgcaaaggaattcaagttcagcttgatctgaaaaat
gaggatggcatgtcaaacagtaagagcgcatctgcatccaaagcaagaggttctgcatct
tcagacaagggcggtggtcgaggtggctcggctggtggcaagaggaagagatga
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