Phalaenopsis equestris: 110021100
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Entry
110021100 CDS
T05601
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
peq
Phalaenopsis equestris
Pathway
peq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110021100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110021100
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110021100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
110021100
NCBI-ProteinID:
XP_020575095
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MSNLLPTLSINAPPFVGPSPPSSAATVAAQDRKIASAEQLVLDLCDPDLRENALLDLSKK
REIFQDLAPLLWNSFGTIAALLQEIVSIYPALSPPTLTPGASNRVCNALALLQCVASHSE
TRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDPEVISFLLQTEIIP
LCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGTVLANMVVSLAEQPS
TRLLKHIIRCYLRLSENPRACEALQNCIPEMLKDGTFNNCLRDDVATRRWLQQLLHNISG
GSLVSTLQPAGFEHILGS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcttctgcccactctctccatcaacgctccgccgttcgtcggaccttcccca
ccttcttctgcggcaacagttgccgcgcaggatcggaagatagcctcagcggagcagctc
gtgctcgatctttgcgaccctgacctcagggagaacgccctcctggatctctccaagaaa
agggagatatttcaggatttagctcctttattatggaattcatttggtaccattgcagcg
ctcctccaggaaatagtatcaatatatcctgcactttcaccacctacattgactcctggc
gcatcaaatagggtttgcaatgcacttgctcttcttcagtgtgtggcttcacattcagaa
acaaggattcttttccttaatgcacatatacctttgtatttgtaccctttcttaaataca
accagcaaaaccaggccattcgagtatctaaggctgaccagcttgggagtaatcggggcg
cttgtgaaggttgatgatcctgaggttatcagctttcttcttcaaaccgaaataattccg
ttgtgcctacgaactatggaaatgggcagcgagctttcaaaaacagtcgcaacctttatt
gttcaaaaaattcttctggatgatgttggactgcgatatatctgcgctacagccgagcgg
ttttttgccgttggaacagtgctagcaaacatggttgtatcacttgcggagcaaccatct
actaggttactgaagcatataattcgttgttacctaagactttcagaaaatccaagagca
tgtgaagctttgcagaattgcattccagaaatgctaaaggatggaactttcaacaattgt
cttagagatgatgtggcaacccggcgctggctacagcagctgctgcataatatttcagga
ggaagcttggtttctacccttcagcctgcagggtttgagcatattttgggaagttga
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