Phalaenopsis equestris: 110021308
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Entry
110021308 CDS
T05601
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
peq
Phalaenopsis equestris
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peq03021
]
110021308
Transcription machinery [BR:
peq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110021308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_24
Motif
Other DBs
NCBI-GeneID:
110021308
NCBI-ProteinID:
XP_020575409
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MDVVTFSNAPSRTSPLGIGSGYSAGWSQPLRRRHLSFVAFKSSDTNSAKTLTKSRKQAKR
AQTISIESASASPASAAVAADLDYSEVAEALENIYKLSPAQESEMELDSKLGRGRHRKKR
CKDGVESGEGVVRNRKRRTRRLSLDGRIALQRLRKEEGELLAGDGVRDDASKEEKEELEV
VKLLREYSVSIDLGSLDWKKMNIPPVLSLAEHNWLFKLMQPMKAMLKVKKNLYEDLGREL
TNVDLAEAVNLSVTRMKRELEVGHAARNKIIKHNLRLVLFVINKHYQDIASAHKFNDLCQ
AGVKGLITAIDRFEPKRALRLSTYALFWIRHYIVRSMTLSSFTRVSFGIEAVRLEIQKAK
LELAFKLRRPPTDEEIIERVRVSPERYYDVLKASKAVGSLNGRHAVTQEEFVDGIADIDG
VGGGKRRQPALRLAIDDVLDSLKPRESLVIRQRYGLDGKGRRTLGEIAGNLNVSREMVRK
HELKALMKLKHPARLDYLRRYI
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggtcaccttttccaacgcgccgtcaagaacatcgcccctcggcatcggctcc
ggctactctgcgggctggtcgcagcccctccggcggcgtcatctctctttcgtcgccttc
aaatcatcagatacgaactcagcaaaaacactgactaaatctaggaagcaggccaagaga
gcccagaccatttccatcgagtctgcctccgcttcccctgcatcggctgcggtcgcggcg
gatttggactacagtgaggttgcggaggcgctcgagaacatatataagctgagcccggcg
caggaatcggaaatggaattggattccaaacttggtcgcggaagacaccggaagaaaagg
tgcaaggacggcgtggagagcggagaaggggttgtgaggaacaggaagaggaggacgagg
cgactgagtttggatgggaggattgcgctgcagcgtctgcggaaggaagagggagagttg
cttgcaggagatggtgtgagggatgatgcctcaaaggaggagaaagaggagttggaagtt
gttaagttgttgcgggaatattcggtgtctattgacttgggcagtttggattggaagaag
atgaacattccgccagttctgtcactggctgagcataattggctcttcaaactgatgcag
cctatgaaggcgatgctcaaggtgaaaaagaatctgtatgaggacttaggtagggagctg
acaaatgtagacttggcagaagcagttaacttgagcgtcacaagaatgaaaagagagcta
gaagttggtcatgcagcaagaaacaagattatcaagcacaacctccgtctggtcttgttt
gtaattaacaagcattatcaagacattgcaagcgctcataagttcaatgacctgtgtcaa
gctggagtgaagggacttattacagccattgatcgcttcgaaccaaagcgcgctctccgt
ttgtctacttatgccctcttttggattcgacattatatagttagatctatgacactttca
agtttcactcgcgtatcctttggcatcgaggcggtcagattggagatccagaaggccaaa
ctagagctggcattcaagctccggaggccaccgaccgacgaagagataattgagagggtg
agagtatctcctgagagatactacgatgtgttgaaggcctcaaaggcagtaggttctctc
aatggaaggcatgcggttactcaagaagaatttgttgatgggattgcagacattgatgga
gtgggaggtggcaagcgaagacagcctgccctccgtctagctattgatgatgtgcttgat
tcacttaagcccagggagagcttggtcatcagacaaagatacgggcttgatgggaaaggt
aggcgaaccttgggagagattgcaggaaacctcaatgtatcaagagagatggtaaggaaa
cacgagctgaaagcgttgatgaagctcaaacatccagctcgactcgattaccttcgccga
tatatttga
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