Phalaenopsis equestris: 110021444
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Entry
110021444 CDS
T05601
Name
(RefSeq) THO complex subunit 5A isoform X1
KO
K13174
THO complex subunit 5
Organism
peq
Phalaenopsis equestris
Pathway
peq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110021444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110021444
03041 Spliceosome [BR:
peq03041
]
110021444
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110021444
Spliceosome [BR:
peq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110021444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
110021444
NCBI-ProteinID:
XP_020575585
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MEAGEMEAEPAIVKTAHDALDEICRAVEEIAAKILLIKKEGRPKSELRELNTQMALLFIT
LRQLNRTILVEEDHIKAETESAKAPVDFTTLQLHNLMYEKNHYLKAIKTCRDFRSKYPDI
ELVPEEEFFTNAPEDIKAKVLASEPAHNLMLKRLNYELFQRKELCKLHEKLELHKKGLVE
TIGSRKKFLSSLPSHLKSLKKATLPVQQQLGILHTKKLKQHYAAELLPPPLYIVYSQLMA
QKEAFGEKIEMEITGSVKDAQTFSQQQASKENGTPSNMENIRLEDDAPDEEDDVQRRRKR
PKKNLPKDNGDQGGILQTHPLKVIVRVFEDEDLQAKPLKLMSLKFEYLIKLNVVCVGVED
QEQLSDENILCNLFPNDTGTELPHQTAKLYAGDFLFFGDRSSSRPYMWAQHLAGMDFLPE
LPPLQRRSEDLKYELRSANISSGLSLYRHENRVQTVLQRIRSRKKAQLALMEQLNFLVKL
KWPSLDTENVTWASHTPLCSLQQWSPVKHVADSSLSSITADKVAASADPELDSRSAPPWE
VESAREDGELPMALPATTVLLADDSSTKISNESSDLDISRSLTLISKNITPPKMLKSSSF
GRHEDDVDLILDYESDADEKMCVESETEIIGFIDEPWVDHAASEFHLVLCRQDGVEQKMK
LEATVKIGIEYPLRAPFFGLRISSNGSQDSFECYNELRAMESEVNFHILKILPVESENYV
LAHQLRCLAMLFDLHFGTGSEKRKGSSANDNLPARRARGRDRRRILSWVGIGCNNEYSLG
H
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaagccggggaaatggaggcggagccggcgattgtaaagacagcccacgatgcgcta
gatgagatttgtagagcggtggaggagatcgcggcgaagattctcctaatcaagaaggaa
ggcaggcccaaatctgagctccgagaactcaacacccaaatggccctcttgttcatcacc
ctccgtcagttgaatcgaaccatattggtggaagaagatcacattaaagctgaaacagag
agtgcaaaggcaccggtggacttcacaacgttgcagcttcataatttgatgtacgagaag
aatcattacttgaaagccataaagacatgcagagattttagatcaaagtatcctgatata
gaacttgtcccggaagaagagttcttcacaaatgctccagaagatattaaagcaaaagtt
ttggcaagtgaaccagctcataatttgatgctgaaaagattgaattacgaactttttcag
agaaaagagttgtgcaagcttcatgagaaattggagctacacaaaaaaggcctcgtggag
accataggaagccgaaaaaaattcctttcaagcctaccgtcacatctgaaatccttgaag
aaggcaacgttacctgtgcagcagcagctaggaattttgcataccaagaagctaaagcag
cattatgcagctgagttacttccacctcctctttatattgtctactcacaattaatggct
cagaaggaagcttttggtgagaagattgagatggagatcacgggaagtgtaaaagatgct
caaactttttctcagcagcaagcaagcaaggaaaatggtacgccgtcaaatatggaaaac
attaggttggaggatgatgcacctgatgaagaggatgatgttcagagaagaagaaagagg
ccaaagaagaaccttcctaaagataatggcgatcaaggaggaatcctccaaactcatcct
ctcaaagttattgtccgtgtttttgaagatgaagatcttcaggctaaacctctgaagctg
atgtcactgaagtttgagtatttgataaagttgaatgttgtatgtgttggagttgaagat
caagagcaactttctgatgaaaatattttgtgcaatctttttcccaatgacaccggcact
gaacttcctcatcagacagctaagctatatgccggtgattttttgttcttcggtgataga
agtagttctagaccatatatgtgggcgcagcatttagctggaatggatttcttgcccgag
cttcctccacttcaacgacgcagtgaggatctgaaatatgaactgaggagtgccaatata
tcttctggactctctctttatcgacatgaaaaccgagttcagactgttttgcaaaggatt
cgctctcgaaaaaaggctcaattggctcttatggagcagctcaatttcttggtgaagctc
aaatggccatcgctggataccgaaaatgtcacctgggcttcgcacacccctctttgtagt
ttgcaacaatggtcgcccgtaaaacatgtcgccgactcctcgttatcttctattactgcc
gataaagttgcagcttctgcagaccccgagctggacagtagatcagctcctccatgggaa
gtagagagcgcaagagaagatggtgaacttccaatggctttaccagctacaactgtacta
ctggcagatgactcaagcacaaagatttccaatgaatcttctgacctcgacatttctcga
agcctgactttgatttcgaagaacatcacgcctccaaagatgctcaaatcctcgagtttc
ggccggcatgaagacgatgtggatctcatactggactatgagagtgatgcggacgagaaa
atgtgcgtcgaatcggaaactgagattattggtttcattgacgaaccatgggtcgaccat
gctgcgagtgagttccatctagttctatgtagacaggatggagtggagcagaagatgaag
ttggaagctacggtgaagatcggtatagaatatcctctcagagccccgttttttgggctg
cgaatctcatcgaatggttctcaagatagctttgaatgctacaatgaacttcgtgccatg
gagtctgaggtgaattttcatattctcaaaatattaccggtggagagtgaaaattacgta
ttggctcaccaacttcgttgcttggccatgctttttgatttgcatttcggtacaggaagt
gaaaaaaggaagggtagttctgctaatgataatctacctgcaaggcgtgcaaggggtagg
gatcgcagaaggatactttcttgggtaggcattggatgtaataatgaatattctttgggg
cattga
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