Phalaenopsis equestris: 110021513
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Entry
110021513 CDS
T05601
Name
(RefSeq) ATP-dependent RNA helicase DEAH11, chloroplastic-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110021513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peq03041
]
110021513
Enzymes [BR:
peq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110021513
Spliceosome [BR:
peq03041
]
Complex C
Other components
Step II factors
110021513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBD_DEAH11
KH_DEAH11_2nd
KH_DEAH11_1st
KH_DEAH11
RRM_DEAH11
Helicase_C
OB_NTP_bind
IBR
DEAD
AAA_22
IBR_1
RRM_1
HA2_C
Rcat_RNF216
zf-C3HC4
AAA_19
zf-RING_UBOX
zf-C3HC4_2
IBR_2
nSTAND_NTPase5
ABC_tran
WHD_HA2
nSTAND3
AAA_30
AAA_29
DAP3
Motif
Other DBs
NCBI-GeneID:
110021513
NCBI-ProteinID:
XP_020575693
LinkDB
All DBs
Position
Unknown
AA seq
1740 aa
AA seq
DB search
MSYQRHDHRHGWPPGRVSGCRNTPSSTYHARPPGVRFHRGFEQPLSPVSSPGFTLVLLRR
GGGRGLPCPKVIADLISTCPAVPVDFFVRAEGNVAAKLFFQQWCHVLEALVFFWRRRLEG
FHLLTPSLISGVSVCSDRDELEERLRVLFTSHINGLLEGESVQKINSRIGEVSAEVSKVG
KQLSRPQHLGFHQKLQEERKSLIEELGLLKDRLGEFRAALGCLLDHLGGKKTLGLREMGQ
VEIFRFDVELDWARVHHIILRECKRLSSSLPIYSYRREILRGVSSNQVVVLIGETGSGKS
TQLVQFLADAGLASSGLIICTQPRKIAAMTLARRVCEETFGCYADNFVSFHATTLFSQRL
KSGIIYMTDHYLLQHYMNETSLTGISYIIVDEAHERSLNTDLLLALIKKKLLERLDLRVI
IMSATADASKLADFFNGCCTFHVKGRTFPVDIKYVTDVSDEDLWCQTPKHIPSNYSSYLS
NVIKMVSIIHKKEKAGGILAFLTSQAEVEWACENFSDSSAVVLPLHGKLSHEDQIRVFCN
YPEKRKIIFSTNVAETSLTIQGIKYVVDSGMVKESRFEPSTGMNLLRVTWTSQSSANQRS
GRAGRTEPGKCYRLYSKSDFQSMTVHQEPEIRKVHLGVALLRILILGVKNVQDFEFVDAP
SPEAIDKAMQNLVQLGAVVCKNHFFELTSTGSTLVKLGIEPRLGKIILESFSCGLRKEGV
VLAAVMANYSSIFCRVGSDVDKHKADCLKVPFCHHEGDLFTLLSVYLEWENKGTNKNEWC
WQNSINAKSMRRCHEAVLELENCLKNELNMITPSYFVWNPHKPSERDKDLKKVILFSLVE
NVAMYTGSDQLGYEVALTGQKLPLHPSCSLLVYGQKPSWIVFTEILSSENQYLVCATAVD
RESLCTVRLLSFNIAQMEEKKMLTKIISGLGNILLRRLCGKSNHGIESIMSYIQKECMDR
NFYIRADFDRREIHLFASSKNLEKVSSMFNDVLECERRLLREECIEKCLFIAVAGSFPSF
ALFGSGGEIKHLELDNRCLTVEIFYPRVHELNNKELILLINQNISGIANIYVFGGNGQEG
PDTCKWGKVTFLKPEDAQKAITKLNRLEFHGNLLKVVPAVVAERRNLPFSAVRTKVCWPQ
RPSRGVALVECSAEDAEYIIKNCCPKFIGGSYVQCSASTKFPNCLFVTGIRKDASEREIY
YDFLNATNGKINSVKLLRGEAIDCRSVDSYEQALVQEIAPFMPNKKHSFRVEVLKPEPKD
VMVRAAINFDGSLHLEAAKALDHIQGKVLPGCLSWQKMECQDMFHSSICCTTRIYSVIKG
PMESLLEMFKLQKGVTYSVDRNVNGSYRVKLSAHATKIIADVRRPLENLMKGKTLTHPGL
TPSLTQLLLSRDGINLLKSLERETGTYIFYDRQNFHIKLFGSPNDVVAVEEKLVQSLQHL
YDNRPLDIRLRGHNLPPNLMKEVILRFGADLQGLRLLVSGVELTLSTRRLVLSARGSMEQ
KQKVEEVISGLATSLSSGSLQSSPIPETMCHICLCELDEPFRLETCGHKFCQGCLVNQCE
ATIRSRDGFPLRCAKEDCQELLLLTDLKALLLGEKLEELFQASIAWFVASNGGDYRFCPT
PDCPGIYKVAASEEAALSDGPFVCGACSVETCTWCHLEYHALISCERYREYKESPDFSLH
DWRLGRENVKDCPVCRHVIEKVDGCNHVECRCGRHICWVCLEVFTASDACYSHIRSFHDI
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccagcgccacgatcaccgccatggctggccgccgggaagggtttctggctgc
cggaacactccgtcatcgacctaccatgctcgcccaccgggtgttcgcttccatcgggga
tttgaacagccgctgtctccggtctcttcgcctggtttcactcttgttctcttacgtcgc
ggcggtggtcggggattaccttgccctaaggtaatcgcggacttgatatctacttgcccg
gcggtccccgttgatttcttcgtccgtgcagagggcaacgttgccgcgaagctgttcttt
cagcagtggtgccatgtcttagaagcgcttgtctttttttggaggcgtcgtctcgaaggc
tttcatttgctcacgccatcactgatttccggggtttcggtttgttctgatcgagatgaa
ttggaggaacgcctgcgagtgctctttacgagtcacatcaacggattgctggagggggaa
tcggtgcagaaaattaatagtaggattggtgaggtttctgcggaggtgagtaaggttggg
aagcagctttcccgaccccagcacttggggtttcatcagaagttacaggaagaaagaaag
agtttgatagaggaattagggttgctgaaggacaggctgggggagttccgcgctgcttta
ggttgcctgcttgatcatcttggcgggaagaagactcttgggcttcgagagatggggcaa
gttgagatttttaggtttgatgttgaacttgactgggccagagttcaccatattattttg
agggagtgcaagagactcagtagtagtttacctatatactcttaccgtagggaaattctt
cggggtgtgtcttctaatcaggttgtggtcttgattggggaaacaggttcaggaaagagc
acacagctagtacagtttctagctgacgctggcttagctagtagtggattgattatttgc
actcaaccgcgcaagattgctgcaatgactctcgcaaggagggtttgtgaagagactttt
gggtgttatgctgataactttgtcagtttccatgccaccaccttattttctcagaggtta
aaatctggaataatatatatgacggatcactatctactgcaacactatatgaatgaaaca
agtttaactggtatttcatatatcattgttgatgaagctcatgaaagaagcctgaatact
gatctcttattagcattgatcaagaagaaattgctcgagagacttgatttacgtgttata
ataatgtctgctacggctgatgctagtaaactggcagatttttttaatggttgttgtacc
tttcacgtcaaagggaggacttttcctgttgatatcaaatatgttactgatgtgtctgat
gaggatctttggtgtcagaccccaaagcatattcccagcaattattcttcatacctttct
aatgttatcaaaatggtgagcataattcacaagaaggagaaggctggtggaattctggca
tttttgacttctcaagctgaagtagaatgggcttgcgaaaatttcagtgattcttcagca
gtggtcttaccactgcatggaaaactttcgcacgaagatcaaatccgtgttttttgtaac
tacccagagaagagaaaaatcattttttccacaaatgtggcagaaacttcgctcacaata
cagggcatcaaatatgttgtcgactctggcatggttaaggagagcagatttgaaccaagt
accggcatgaatttgcttagggttacctggaccagtcaaagttcagcaaatcagagatct
ggccgagcaggtagaacagaaccaggcaaatgctacaggctttattctaaatcagatttc
cagtcaatgacagtgcatcaagagcccgaaattcgtaaagttcaccttggagttgctctt
ttgaggatccttatcttgggcgtgaagaatgtacaggacttcgagtttgttgatgctcca
agcccggaggcgattgacaaagccatgcagaatcttgttcagttaggtgcagttgtgtgc
aaaaatcatttctttgagcttacttctactggttctaccttggttaaattgggtattgag
cctcggcttggcaaaataatcctagagtcattttcatgtggtttaaggaaggagggtgtt
gttcttgccgcagttatggcaaattatagtagtatattttgtcgagttggtagcgatgtg
gacaagcataaagctgactgcttgaaggtccctttctgccatcatgaaggagaccttttt
actctgctttctgtttacttggaatgggaaaataaaggcacaaacaaaaatgagtggtgc
tggcagaatagcatcaatgccaagtctatgaggagatgtcatgaagctgtattggagtta
gaaaattgcctaaaaaatgagctcaatatgattactcccagctattttgtatggaacccg
cataaacctagtgaacgcgataaggatctgaagaaggttattctcttttctcttgtggag
aatgtagctatgtacactggatccgatcaacttggttatgaagtggctttaacagggcaa
aaactgccgcttcatccttcctgttcacttctggtatatgggcagaagccaagctggatc
gtgtttactgaaatattgtcaagtgaaaatcagtatctagtttgtgcaactgctgttgat
cgggaaagcctgtgcacggttcgactcctttcatttaatattgcacaaatggaggagaag
aagatgcttacgaagattatcagtgggcttggaaatattctacttcgaaggttatgtggc
aagtcaaaccatggcatagaaagcattatgtcatacattcagaaagaatgcatggaccga
aatttctatattagagcagatttcgatagaagagagatccatttatttgcttcttcaaag
aatttggaaaaggtctcttccatgtttaatgatgtcttagagtgtgaaagaagattgttg
agggaagagtgcattgagaaatgcttattcattgctgttgctggaagttttccttccttt
gcactatttggttccggtggtgaaattaagcatttggaactcgacaatcggtgtttaaca
gtggaaatattctatcctcgtgtccatgagttgaacaataaggaacttattctgttaatt
aatcagaacatttcaggtatagctaatatttatgtatttggagggaatggacaagaagga
ccagacacttgtaagtggggcaaagtaacatttcttaagcccgaagatgcacaaaaagct
atcactaagctaaataggttggaatttcatggaaacttgttgaaagttgtgcctgcagtg
gtggcggaacgtagaaatttacctttttctgctgtaagaaccaaagtatgttggcctcaa
aggcctagcaggggagttgcacttgtcgaatgttcagctgaggatgctgaatatattatc
aagaattgctgtcctaagtttattggaggaagttatgtacaatgttcagccagcacaaag
ttcccaaattgtctttttgtgacaggaattagaaaagatgcttcagaacgggaaatatac
tacgattttctaaatgcaactaacgggaaaattaatagtgttaaacttcttaggggagaa
gctatcgattgtcgttcagttgatagttatgagcaagcactcgttcaagaaattgctcct
ttcatgcctaacaagaagcacagttttagagttgaagttttaaagccagagccaaaagat
gttatggtgagagcagctatcaattttgatggaagtttacatctagaggcagcaaaggct
ttggaccatatccaaggaaaagtccttcctggctgtctttcatggcagaagatggagtgt
caggatatgttccatagttcaatatgttgtactacacgcatatattcagtcatcaaggga
ccgatggaatctttgcttgaaatgtttaaacttcagaaaggtgtaacctattcagtggac
agaaatgtcaatggttcctaccgcgttaagttgtctgctcatgcaaccaaaatcattgcg
gatgtgagaaggcctcttgagaatctcatgaaagggaagacattaactcatccaggccta
actccttcgctgacacaactcctattgtctcgtgacggcatcaatctcctcaagtcgcta
gagagggagactggaacttatattttttatgataggcagaactttcacattaagctgttt
ggttctccaaatgatgttgttgctgttgaggaaaaactggtccaatccttgcaacatctt
tatgataacaggccactagacattcgccttcggggtcacaatcttcccccaaatttgatg
aaagaagtcatcctgagattcggtgcagaccttcaagggcttcgcttacttgtttcaggg
gttgagttaactcttagcacccgacggcttgttctgtctgctcgtggaagcatggaacaa
aaacagaaagtggaggaggtgatttctggcttggcaacctccctaagcagcggctctctt
cagtcatcaccaattcctgaaaccatgtgccacatttgcttgtgtgaactggatgaaccc
ttccgtcttgaaacttgtgggcacaagttctgtcagggctgcctggtgaaccaatgtgag
gcgactattaggtctcgggatgggtttccactgagatgtgccaaggaggattgtcaggaa
cttcttctacttactgacctgaaagcccttcttcttggagagaaactagaagaactcttc
caggcctcaattgcctggtttgtagcaagcaatggtggggattaccgcttctgcccaact
ccggactgtccggggatctacaaagtagctgcatcggaggaggcggctttgtccgatgga
ccgtttgtgtgtggagcttgctccgttgaaacttgcacatggtgccaccttgaatatcat
gcattaatcagctgcgaacggtacagagagtacaaagagagtcctgatttttcactgcat
gattggagattggggagggagaatgttaaggattgccctgtctgtagacatgtgattgag
aaggtagatgggtgcaaccatgttgagtgtcggtgcggccggcatatatgttgggtttgc
ctcgaagtatttactgccagtgatgcttgctactcacacatcagatcatttcatgatatc
tga
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integrated database retrieval system
