Phalaenopsis equestris: 110022145
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Entry
110022145 CDS
T05601
Name
(RefSeq) uncharacterized protein LOC110022145 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
peq
Phalaenopsis equestris
Pathway
peq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110022145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110022145
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110022145
mRNA degradation factors
5'-3' decay
Decapping complex
110022145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
110022145
NCBI-ProteinID:
XP_020576612
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MENLVEFDREGGISDNIQRDAELEVLDGGAAGDARFDATQYEFFGNSSMNEVELGGLEDD
GDESGFDDFHDGDYAFPTHQYRSEGEGLGYSSEINDLASSFLQLNTDITRTSSSVVLGGR
GSLSRENSAPTDRARELLELPGWPDQSFLDADNVQDGKRWWSHPYPSPSRLAESKPLHRT
ISSPYEQQQKVFPQSAGQQQQLNSFEQVPLRKHSFTSYPPPGDLSQGSKILSHNIDILTP
SVGPQANFSAHQVFPFSGPQPLADAYHGMRYRGNMAQFVSPGLNIINPEENNLLRQSSVN
FGDRNNLFPAIFQQNLSHPNGLVTSQQPIFQNVQPSLPHFPQLPPQLVGSHLSPHMLETI
RGMPDLRDQGLKTGQRGRQNMRFSNQLLDMGIHKNSNAWPQFRSKHMSTEEIESILRVQH
AATHSSDPYSDDYYHQACLAKRCSGSKLRRHFCPNSIKELPSRSRASSEPHAYLQVDALG
RIPFSSIHRPRPLLDVDSPSTAVGSSSELRCSVKPLEQEPMLAARITMEDSLCLLLDVDD
IDRFLQFNPPHDGESQLKRRREALLEGVAASLQLVDPLDSNKVGQSVGIAPKDDVTFLHI
VSLPKGRKLLSRYLLLLYPSSELARIVCMAIFRHLRYLFGGLSSDSGAAETTSALARTVS
LCICGMDLSTLSACLAAVVCSSEQPPLRPIGSAAGDGASMVIKSVLERAEFLKDDHGTST
YSIHSRAWWQESFNAFFRLLLKYCLSKYETIMQSLASSSHDSSMAGSEATLAIRKEMPVE
LLHASLPHTNEQQRKQLLELAQRSMPATG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacttagtggagtttgatcgggagggcgggatttccgataatattcagcgcgat
gcagagcttgaagtgttggatggtggcgcggcaggtgatgctaggtttgatgctactcag
tatgagttctttggtaacagttctatgaatgaagtggagcttgggggcctagaagatgat
ggtgatgaatctggatttgatgattttcatgatggagattatgcgtttccaactcatcag
tatagatcagagggtgaaggcttaggttattcctctgaaatcaatgatcttgcaagcagt
ttcctgcagttgaatacagatatcactcgaacaagcagctcagtagttttgggcgggaga
ggatcactctctagagaaaattctgctcctacagatagggcaagggagttgttggaattg
cctggctggccagatcagagttttttagatgctgataatgtccaggatggtaaacggtgg
tggtcacatccatatccttccccttctcggcttgcagaatccaaaccgttgcacagaaca
atatcatccccttatgaacagcagcagaaagtcttccctcaatctgctggacagcaacag
cagctaaattcgttcgaacaagttcctcttcgaaagcattcttttacttcctaccctccg
cccggtgatttatcccaaggttccaaaattctgtcccacaatatagacattttaacacca
agtgttggtccccaggcaaacttttcagcacatcaagttttccctttctctggtcctcaa
cctcttgctgatgcatatcatgggatgagatatcgtggaaacatggcacagtttgtctct
ccaggcttaaatattattaatccggaagagaacaatttgttgagacaatccagtgtaaat
ttcggtgaccgcaataatctgtttcctgctatatttcagcagaatttgtctcatccgaat
ggcctagttacatctcagcaacctatatttcaaaatgttcagccttctctgccacatttc
ccacaattaccacctcaacttgtcggttcacatctttctccccacatgcttgaaacaata
cgaggaatgcctgatttgagagatcaaggattgaagactgggcaaaggggaaggcaaaac
atgcgattttctaatcaacttttagatatgggaatccataagaacagcaatgcatggcct
caatttcgatccaagcacatgtcaactgaagagatcgaaagcattctgagagttcagcat
gctgcaacacatagtagtgatccctactctgatgattactatcatcaagcctgtctggca
aagagatgctctggatcaaagctgaggcgccacttctgtccaaattctatcaaggagctg
ccttcaagatcccgagctagtagtgagccacatgcttatcttcaagtggatgctcttggg
cgaatccccttctcttcaattcacaggccacgtcctctactggatgtggactcaccttct
acagctgtaggaagcagctctgagctgagatgttctgtgaagcctctagagcaagagcca
atgttggctgctagaatcactatggaggacagcctttgccttctccttgatgtagatgat
attgaccggtttctgcagttcaacccaccacatgatggtgaatcccagcttaaaaggaga
cgggaggctctcttggaaggggttgcagcatctcttcagctggttgatccactcgattct
aataaagtaggccaatctgtgggaatagctcctaaagacgacgtaacctttctccacatc
gtctctctcccgaagggccgtaagcttttgtcacgctatctcctgttgctttaccctagc
agcgagctagctcggattgtttgcatggccatttttcgccacctcaggtatttatttggt
ggtctgtcctcagattccggggcagccgaaaccacatcggctctcgccagaactgtatct
ttgtgtatttgtgggatggatttgagtacactgagtgcatgcttagctgcagttgtctgt
tcttcagaacaacctcctctccgtccaattggaagcgctgctggtgatggagcctccatg
gttataaaatcagtacttgagagagcagaattcttgaaggatgatcatggtacaagcacc
tatagcattcacagtagagcttggtggcaggaatcattcaatgctttcttcaggcttcta
ttgaagtattgcttgagcaagtatgaaactataatgcagtcattagcctcgagctcacat
gattcttcaatggctggatcagaggcaacccttgcaattcgcaaggagatgccagttgaa
ttgttgcatgccagcctaccccatactaacgagcagcaacgaaagcaattactggaattg
gctcagcgatccatgccagctactggatag
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