Phalaenopsis equestris: 110022243
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Entry
110022243 CDS
T05601
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110022243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110022243
03012 Translation factors [BR:
peq03012
]
110022243
Enzymes [BR:
peq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110022243
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110022243
Translation factors [BR:
peq03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110022243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
DUF7260
AAA_19
nSTAND3
NACHT
Motif
Other DBs
NCBI-GeneID:
110022243
NCBI-ProteinID:
XP_020576741
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MTVRRVFNSCINSFDCHRHLAAIEATRSHHVSMSYRPNYQGGRRGGGAGGGRGRGGGASG
RRGGGGGGGEQRWWDPQWRAERLREMAGPVEKLDPNEWQTKLQQLKDGSQQELIVNRNFG
REGQQTLEEMAHQHDLYFHAYNKGKSLVFSKFPLPDYRADLDQRHGSTQKEIVMSIETER
RVEDLLARSKAAGTTSDTGNISSQTRKHDSWSSSTATIKECFSDTVFSKHDLIKDSQPNT
VRERFSAELRDLQISKKATFSATAMQSFRQKLPAYKLKEIFLKSVSCNQVLVVSGETGCG
KTTQLPQFILEEEIANLKGADCSIVCTQPRRISAISVATRVATERGETIGETVGYQIRLE
AKRSAQTRLLFCTTGVLLRKLVQEPDLGGVSHLIIDEIHERGMNEDFLIIILRDLLPRRP
DLRLILMSATINADLFSKYFGNSPVIHIPGFTFPVEEIFLEDILEKTHLQIMSEFDNFHG
NSRRRQTVSKSDPLTEMFEDVEIDSCYKNYSMSTRQSLETWSGSLLDLGLVEATIEYICR
SEGDGAILVFLTGWDEISKLLDKIKANTFIGNPSKFLVLPLHGSMPTVNQREIFDRPPRN
MRKIILATNIAESSITVDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAQQRKGRA
GRVQSGVCYRLYPKLIHDAMPAYQLPEILRTPLQELCLHIKTLQLGSVATFLGKALQPPD
PLAVNNALELLRTIGALDEREELTPLGRHLCTLPLDPNIGKMLLMGSIFQCLDPALTIAA
ALAYRDPFVLPINRKEEADVAKRSFAGDSCSDHIALLKAFDTWKDAKRAKQDRAFCWENF
LSPLTLQMMDDMRNQFLDLLSDIGFVNKTKGIKAYNLYGGDIEMVRAILCAGLFPNVIQC
KRRGKRTAFYSKDVGKVEIHPSSVNARIHSFPLPYMAYSEKVKTTSIFIRDSTNISDYAL
LLFGGSLIPSKTGEGIEMLGGYLHFSAPKSVRQLIQRLRGELDSLLQRKIEFPALDMSVE
GKGVVDAAIELLHS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgactgtccgccgcgtcttcaattcctgcatcaactctttcgattgccatcgccattta
gcagcgattgaagctacccgctcacaccacgtctccatgtcgtaccgcccgaattaccag
ggtggccggcgaggcggcggtgctggcggaggccgaggaagaggtggcggcgctagtggc
cgaagaggaggtggcggcggcggcggcgagcagcgatggtgggatccccaatggagagcc
gagcgacttcgcgaaatggccgggccggtggaaaagctcgatccaaacgaatggcagact
aaactgcagcagttgaaagatggtagtcaacaagagctaattgttaaccgtaattttggc
cgtgaagggcaacagacacttgaagagatggctcatcagcatgacctttatttccatgct
tacaacaaggggaagtcactagttttcagcaaatttccattaccggattaccgggcagat
ctagatcaacgtcatgggtcaacacagaaagagattgtgatgtctatagaaactgagaga
agggttgaagatctcttagcaagatcgaaggcggcagggaccacaagtgatacagggaat
atttccagccagacaagaaaacatgattcttggagttcatcgaccgcaacaataaaagaa
tgtttttctgatactgttttttctaaacatgatttgattaaagacagccagcctaacact
gtcagggagaggttcagtgctgaacttagagacctacaaatttctaagaaggcaactttt
agtgcaacagctatgcaatcttttaggcaaaaactgccggcatacaagttaaaagagatt
tttttaaaatctgtgtcatgcaaccaggtgctagttgtctccggagagactggttgcggc
aaaaccacacagctcccccaatttattcttgaagaggaaatagcaaacctcaagggtgca
gactgcagtatagtatgcactcaacctcgtcgtatatctgctatttctgttgcaacgagg
gttgctactgaaaggggagagactattggggaaactgttggttaccagatccgcttagaa
gctaagcgttctgcacaaacccggcttctcttttgtacaactggagtgttactgcgaaaa
ctggttcaagagcctgatttaggaggagttagtcatctgataattgatgaaattcatgaa
agaggcatgaatgaggatttcctcatcataattttgcgtgatcttcttcctcggcgtcca
gacctcagattaattttgatgagtgctacaataaatgctgatttattttcaaaatatttt
ggaaactcacctgtaattcatattccgggttttacttttcctgtagaagaaattttcctt
gaagacatcttggagaaaactcatttacagatcatgtcagagtttgataattttcatgga
aattctagaagaaggcagacggtgagcaaaagtgaccctttgactgaaatgtttgaggat
gttgaaattgatagctgttataaaaattatagcatgtccacgaggcaatcgcttgagacg
tggtctggttcgttgcttgatttgggtcttgtggaagcaacaatcgagtatatttgccgt
tctgaaggagatggagcaatcctcgtgttccttactggatgggatgagatatcaaaattg
cttgacaagattaaagcaaacacatttatcggcaatcctagcaaatttctagttcttcca
ttgcatggttccatgccaacagttaatcagcgggaaatatttgataggccaccaaggaat
atgaggaagatcattcttgcaacaaatatagcagaaagcagtatcactgttgatgatgtt
gtctatgtcatagattgtgggaaagcgaaagaaaccagctatgatgctcttaataagctt
gcttgcttgttaccgtcttggatatctaaggcttcagcccagcagagaaagggccgtgca
ggccgtgttcaatctggagtttgttataggctgtacccaaaacttattcatgatgcgatg
ccagcatatcagttaccagaaattcttcgtactcctttgcaagaactttgcctacatatc
aaaaccttacaacttgggtcagttgcaacatttcttggaaaggcactacagccaccagat
ccacttgctgttaataatgcactcgaacttctcaggactataggggcattggatgaaaga
gaggaactgactcctctagggcgtcatctttgtactctaccattagatccaaatattgga
aaaatgttgctaatgggatctatattccagtgcctggatccagcattgacaattgccgct
gctcttgcgtatcgtgatccctttgtccttcctataaacaggaaagaggaagccgatgtt
gctaaaagatcctttgctggtgattcttgtagtgatcacattgctcttcttaaggctttt
gatacatggaaagatgcaaagcgagctaaacaagaccgtgctttctgttgggagaatttt
ctatcaccattaacattgcaaatgatggatgacatgcgaaaccaatttcttgatctatta
tctgacattggctttgtcaacaaaactaaaggaattaaggcatataacctttatggaggt
gacattgagatggttcgtgccatattgtgtgctggactctttcctaatgtcattcaatgc
aagagaagagggaagaggacagcattctacagtaaagatgtgggaaaagtggaaatccat
ccatcttccgtcaatgcaaggatccactcttttcccctgccttatatggcttatagtgaa
aaagttaaaactacatcaatttttattagggattcaacaaatatttcggattatgcttta
ctcctctttggtggcagcctaattcctagcaaaactggcgaggggattgaaatgctagga
ggatacttgcatttctccgcccctaagagtgtgagacaactcattcagagattgagagga
gaacttgacagccttctgcaacggaaaattgaattcccagcccttgatatgtctgtcgaa
ggaaaaggagttgtggatgctgctatagaattgttgcatagttga
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