Phalaenopsis equestris: 110022526
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Entry
110022526 CDS
T05601
Name
(RefSeq) cleavage stimulation factor subunit 50 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
peq
Phalaenopsis equestris
Pathway
peq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110022526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110022526
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110022526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_Aladin
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
eIF2A
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Cytochrom_D1
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_SCAP
Tricorn_N
COBRA
Motif
Other DBs
NCBI-GeneID:
110022526
NCBI-ProteinID:
XP_020577170
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MDANLENALQEGKLRRQINDLIVAHLRGDNLNQAASVVATATMTPLTTEVSPNRLLELVA
KGIATERDEGLKGPFSTAPLDASTSLSSVPVMASGIDFSAMQDVKGSSKNFPKHETKHIS
EHKNIARCARFSPDGQYVATGSSDYSIKLFEVSKIKQIMGFDARDGPIRPVIRTFYDHAE
PINDLDFHPQGTILISGAKDNTIKFFDFSKTVARKAFRVIQDTHNVRSVSFHPSGEFLLA
GTDHPIPHLYDVNTFQCYLPSNFQNLNTNSAINQVRYSLSGSLYVTASKDGSVLLWDGAT
AQCVRQIVGAHGLTEATCASFTKDQRYVLSCGKDSTIKLWEVGTGRLVKQYLGAVHTQLR
CQAVFNETEEFILSIDELNNEVVIWDALTAEKVARWHSNHVGVPRWIEHSPTEPAFVTCG
IDRSVRYWKEIS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaacctcgagaatgctcttcaggaagggaagctcaggcggcagatcaatgac
ttgattgtagcccatcttcgcggcgacaatctcaatcaggctgcttctgtagttgcaacg
gctactatgactccattgaccaccgaggtttctcctaataggctgcttgagcttgttgcc
aagggcattgcaacagagagagatgagggattaaaaggacctttttctactgcacctctt
gatgcatccacaagtttatcttcagtgccagttatggccagtggtattgatttcagtgcc
atgcaggatgtgaaaggctcatctaagaatttcccaaaacacgagaccaagcatatttct
gagcataagaatattgcaaggtgtgcaagatttagtcctgatgggcagtatgttgccact
gggagttcggactattcaattaagctttttgaggtttccaaaattaagcaaataatggga
tttgatgctcgagatggaccaattcgtcctgttattcggacattttatgaccatgcagag
cctatcaatgatctagattttcatccacaaggcacgatattgatatccggtgcaaaagat
aacaccataaagttttttgatttttcaaaaacggttgcaaggaaagcatttagggtcatt
caggatactcataatgtgagatctgtatcttttcatccttccggggaatttcttttggca
ggtacagatcatcctattcctcatttatatgatgttaatacctttcaatgttatttacct
tccaattttcaaaacttgaatacgaattcagccatcaatcaggttagatactctttatct
ggtagcttatatgtgacagcctcaaaagatggctctgttcttttgtgggatggggcgaca
gcacaatgtgtacgacagattgttggggctcatggattgacagaggctacgtgtgcaagt
tttacaaaagatcagagatatgtgctctcttgtgggaaggattctacaataaaactatgg
gaagtaggaactggaaggcttgtaaagcagtatttgggagcagttcacactcaattacgc
tgtcaggctgtcttcaatgaaactgaggaatttattctatccattgatgaactaaataat
gaggtggtgatatgggatgcattgactgctgagaaggtggcaagatggcattccaatcat
gtaggtgtgcctagatggatagagcactctccaactgagccagcttttgttacctgtggg
attgataggtctgtcagatattggaaggagatatcgtga
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