Phalaenopsis equestris: 110023662
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Entry
110023662 CDS
T05601
Name
(RefSeq) uncharacterized protein LOC110023662 isoform X1
KO
K06100
symplekin
Organism
peq
Phalaenopsis equestris
Pathway
peq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110023662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peq03021
]
110023662
03019 Messenger RNA biogenesis [BR:
peq03019
]
110023662
Transcription machinery [BR:
peq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110023662
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110023662
U7-dependent histone pre-mRNA processing factors
110023662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
CRM1_C
INTS7_N
Motif
Other DBs
NCBI-GeneID:
110023662
NCBI-ProteinID:
XP_020578837
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MVMMQARWADRAAGLLNSAKSSGNVASKLDQLRQLREVLLVRDSSLLPEFAPRLTELEVQ
LPGAARKLLTEILGEIGKKHVELLPAIVPTLLTYLNDETPPVARQAILSGTSLFCNYFVK
VAIQGLNSNEVNEITKSSWASMLKFKNSVLPLAIQPGIDGVRLLAVKFIEAMVLLYTPDP
SLHSDPPQEFDGFQFNISWLKGGHPLLNVGDLAIEASQSLRLLLDQLKLPQVKFLSNSIV
IVLINSLSVIARRRPSFFGRILPVLLSLDPEMSVIKGVQVPRAHHALKNAFMACMQCTHS
SAVPWRARLVEALRIMNSGEPKEQLIKQEKSLDAAASDVGGSLSSKLKQLMEDKSLSQAS
DEVHSDPGRKRSLDEDSQEALADDFVSEKRIRQSPTTTDSVQMGHPLCDSMPYTRGEDSG
PVLQLVGMFGALVAQGKKASEPLEILISSISSDLLAEVVMANMRYLPSLSPKADEEDESN
HPISSVSGLPSSTSALNAFSLSNAFSLVTSQLNLQQFPSQNMSTIHIKREDEVIIKEEKQ
FTSFGADHAQILPQMHASEATNSLFIEKNNVGLQVYENDSETIEQKIPGLDSSSCFNETQ
ESPDASFRLDEIKERTPEHAISSGVTASLDISPSTSNVSYSFETLSPRANETPATSSHAS
SSQFFLPKMVICNVDLTDEQKDNLQKVAFTRIIEAYKQVTVSGGSSVRLSLLAHLGTEFP
LDLDPWGILQKHVMSDYVNHEGHELTLRVLYRLYQEAEQDQDFLSSRTATSVYETFLLNV
AEALRDTFSASDKSLGRLLAEVPYLPEGVLRMLECLCSPESKEKLDTDFQNGDRVTQGLS
AVWSLILLRPSSRDRCLQIVLQSAVHHLDEVRMKAIRLVANKLFPLSGISQKIEDFASEK
LRLVLDDISCPDDTNDNESSHTLQKESDLEMPSTRVSPDSLSVKSATSYFSEAQKCISLY
FALCTKKHSLLRQIFAIYRSIPKPALEAVHRHIPILVRTIGSSPELLSIILDPPPGSETL
LMQVLQILTDGTVPSQELISSVRRLYNTKLKDVEILFPILSFLSKDEILPLMPQLVNLPL
DKFQFVLTRLLQDSPQSSDSLTPAEVLISIHGIDSEKDGVPLKKIMDACSACFEQRQVFT
QQVLAKVLNQLVEQIPLPLLFMRTVIQAIGVYPGLMDFVMEILSRLVSKQIWKYPKLWVG
FLKFAVQTKPQSFNVLLQLPAAQLEIALNKNPVLKSPLKEHANQPNIRSTLPRSSLVVLG
LANDPQRSGPVSQTSGQAQPPSQTPAAAAADTASLCC
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgatgcaggcgagatgggctgacagagcagcaggtctcctgaactcagcgaag
tcctcaggcaatgttgcatcgaagctggaccagttgcgccagttaagagaggtcctcctc
gttcgggactcctccctcctgccggagtttgctccacgactgaccgaattggaggtccag
ctgcccggcgccgcccgcaagcttcttaccgagatacttggtgagattggaaagaagcac
gtagaacttctgcctgctattgttcctactctattaacctatttaaatgatgaaacacct
ccggttgctcgacaagcaattttgtctgggacttcattattctgcaattattttgtgaag
gttgcaattcagggtttaaattcaaatgaggtaaatgaaattacaaagtcatcctgggca
tcgatgctgaaatttaaaaattctgtattgccattagcaatccagcctgggattgatggt
gtaaggctgttagctgtgaagttcattgaggcaatggttctcctttatacgcctgatcca
agtttgcattcagatcctccccaagaatttgatgggtttcaatttaacatttcatggtta
aagggaggccaccctctccttaatgttggtgatttggcgatcgaagccagtcaaagtttg
agactattgcttgatcaactcaagcttccacaagtgaagttcctcagcaactccatagtt
attgttctgatcaatagtctctcagttattgcaaggaggaggccttctttttttggtcgc
atattaccagttctcctttctctggatcccgagatgtccgttatcaaaggagtacaagtt
cctagggctcaccatgccttgaagaatgcttttatggcatgtatgcaatgcacacattca
agtgctgtaccgtggcgtgctcgcttggtcgaagctctaagaatcatgaacagtggggag
ccgaaggaacaactaattaagcaagagaaaagtctagatgctgcagcttctgatgtgggt
ggttctctgtccagtaagctgaaacaacttatggaagataaatccttatcgcaagcatct
gacgaggtacatagtgatccgggccgtaaaagatctctagatgaagattctcaagaagct
ttagccgatgatttcgtatctgagaagcggattagacaatcaccgacgactacagattct
gttcaaatgggacatcctttgtgcgattctatgccttatactaggggtgaagactctggt
ccagtgcttcaactcgtcggaatgttcggcgccttggtcgcacaaggaaaaaaagcttcg
gagccattggagattcttatttcgagcatctcttccgatttgcttgctgaagttgttatg
gctaatatgcgatatcttccatctttgagtcctaaggcagatgaggaggacgaatcaaac
caccctataagtagcgtgtctggtctgccgtcttcaacttctgctttgaatgctttctca
ttatcaaacgcattctcattagtcacatcccaattaaatttgcaacaatttccatctcag
aacatgagtacaattcacatcaaacgtgaagatgaagttataataaaggaggaaaaacaa
ttcacgagctttggtgcagatcatgctcagatattgcctcagatgcatgcatctgaagcc
acaaattctctctttattgagaagaataatgtgggtttacaagtatatgagaatgattcc
gagacaatagagcaaaaaatacctggtcttgattcaagtagttgtttcaacgaaactcag
gaatcacctgatgcatccttccggttggacgaaattaaggagcgaactccagagcatgcc
ataagttcaggtgttacggcttctctcgatatttctccctccacctctaatgttagttat
tcttttgagacccttagcccgagagcaaatgagacaccggccacatcttcccatgcctcc
tcttcccaattttttcttccaaagatggtaatttgcaacgtagatcttactgatgaacaa
aaggataatctgcaaaaagtggcatttacgcgtatcattgaagcatacaagcaagtaaca
gtttctgggggatcaagtgttcgtttatcattacttgctcatctaggaacagagtttcca
ttggacttggatccttgggggattctgcaaaaacatgtaatgtcagattatgtgaatcat
gagggacacgagttgacattacgtgtactatacaggttgtatcaagaggctgaacaggat
caggatttcctttcatccaggacagctacatctgtttatgaaacatttctgctgaatgtg
gccgaagctcttcgggataccttttctgcttcggataaatcactcggtagattgcttgca
gaagtgccgtacctacctgaaggtgttttaaggatgttagagtgcctgtgctcgcctgag
agcaaagagaagctggacactgattttcagaatggtgatagagtcacccaaggcctaagt
gctgtttggagtttaattttgctcaggccttctagcagagatagatgtcttcagattgtt
ttgcagagtgccgttcatcacttggatgaagtgcgtatgaaggcgatacgtttggttgca
aataagttgtttccattgtcaggtatttctcaaaagattgaagattttgcttcggagaag
cttcgtttagttctcgatgatatttcttgcccggatgatacgaatgacaatgagtcatct
cataccctgcaaaaggaaagtgatttggaaatgccctcaaccagagtgtcacctgatagt
ctttcagttaaaagtgctacatcttatttttcagaagcccaaaagtgtatctcactttac
tttgcactttgcactaagaagcattcccttctccggcaaattttcgctatttacagaagt
attcccaagcctgcccttgaggcagttcatcgccatattcccatattggttcgaacaatt
gggtcatcacccgaactccttagcatcatcttggatcctccacctggaagcgagactctg
cttatgcaggttttacagattttgaccgatggaacagttccttctcaagaattgatttcc
tctgttagaaggttatacaacaccaaattgaaggatgttgaaattctttttcctatttta
tcatttctttcaaaagatgagattcttcctcttatgcctcagcttgttaatcttccattg
gataagttccagtttgttcttactcgtttacttcaggattcacctcaatctagtgattca
ctgacccctgctgaagtacttatttctatacatgggattgattctgagaaagatggggtg
ccattaaaaaagattatggatgcttgttcggcatgctttgagcagcggcaagtgtttact
caacaagttttggcgaaggttttgaatcaattggtcgagcagatacctcttcctttgttg
tttatgagaactgtcatacaagcaattggtgtttaccccggtttgatggattttgtgatg
gaaattttatcacggcttgttagcaagcagatatggaaatatccaaagttgtgggttgga
ttcttaaagtttgctgtccaaacaaagcctcaatcattcaatgtgctgttgcagttgcca
gcagcacagcttgagattgccttgaataagaatccagtgctgaaatctccattgaaagag
catgccaatcaaccaaacataagatcaactctacccagatcatctctagtggttctcgga
ctggcgaatgatccccaaaggtccggtccggtttcgcaaacatctggtcaggcacaaccg
ccgagtcaaactcccgccgccgccgccgccgacacggctagcctctgctgttga
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