Phalaenopsis equestris: 110024589
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Entry
110024589 CDS
T05601
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
peq
Phalaenopsis equestris
Pathway
peq03018
RNA degradation
peq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110024589
09123 Folding, sorting and degradation
03018 RNA degradation
110024589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110024589
03041 Spliceosome [BR:
peq03041
]
110024589
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110024589
mRNA degradation factors
5'-3' decay
Lsm complex
110024589
Spliceosome [BR:
peq03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110024589
Complex C
U2 snRNP components
110024589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
DUF150_C
Motif
Other DBs
NCBI-GeneID:
110024589
NCBI-ProteinID:
XP_020580342
LinkDB
All DBs
Position
Unknown
AA seq
93 aa
AA seq
DB search
MLFFSYFKELVGKEVTVELKNDLAIKGILHSVDQYLNIKLENTRVVDQEKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDIDILHDATRREARGA
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcttctcctacttcaaggaacttgttgggaaggaggtgacagtggagctgaag
aatgacttggcaatcaaaggcattcttcattcagtcgatcaatatctgaacataaaatta
gaaaatacgagggttgtagaccaagaaaagtacccccatatgctctctgttagaaattgt
ttcatcagaggttctgtagttagatatgtccagctcccccctgatggagtcgacattgat
attctgcatgatgccaccaggagggaggctcgaggagcttaa
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