Phalaenopsis equestris: 110025188
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Entry
110025188 CDS
T05601
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
peq
Phalaenopsis equestris
Pathway
peq03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110025188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peq03021
]
110025188
03019 Messenger RNA biogenesis [BR:
peq03019
]
110025188
Transcription machinery [BR:
peq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110025188
RNA polymerase I system
110025188
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
110025188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW2_Spt5
Spt5-NGN
KOW6_SPT51-2
KOW4_SPT5
KOW7_SPT5
KOW
KOW5_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF4438
Motif
Other DBs
NCBI-GeneID:
110025188
NCBI-ProteinID:
XP_020581165
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MARHREDEYEEEEDDEELDEEEDDDYRRSTGGRKRGRSDFIDDAAIEDDDEEEYRDEEDE
DEELYGGRKRGSEFFDLEAQVDSADEEEEDEDAEDDFINDAGADLPDESGGRRPHRPLNM
MPEDQEDVEEMERQVYERYAKSSHIEYGEDATEVEQQALLPSVKDPKLWMVKCAIGRERE
TAICLMQKFIDRPELQIRSVVALDHLKNYIYVEAEKEAHVKEACKGLRTIYSSAKVMLVP
IKEMTDVLSVESKTIEISRDTWVRMKLGIYKGDLAKVVDVDNVRQKVTVKLIPRIDLQHL
ANKLENRDVVKKKAFVPPPRFFNIDEAREMHIRVERRRDKDTGEYFEMVENMMFKDGFLY
KTVSMKSIRSQNIQPTFDELEKFRKPGGDGDGDGDADMASLSTLISNRKKGHFMKGDAVV
VVRGDLKNLKGWVEKVEEETVHIKPEIAGLPEALAFNEKELCKYFKLGDHVKVVSGVQEG
ATGMVVKVDGHVLIIASDTTKEDIRVFADNVVKSSEVTSGITKMGDYELQDLVLLFNMSF
GVIIRVESEAFQVLKGVPDRPEVVLVRLREIKSKLEKRTNAQDNRKNIVSVKDIVRVLEG
PCKGKQGPVQHIHRGILFIHDRHHLEHAGFICVKAQSCIVIGGNNDKRSGDKFDARFGLR
PSSPYLQSPRRPPRGPTDRGGRLNRGGGRGHDALVGRTIKIRSGPFKGYRGRVVEVSGTF
VRIELDSQMKIVAVKRDDISDTPGSATPFREPSRYGFGSETPMHPSRTPLHPYQTPMRDA
GATPIHEGMRTPMRSRAWAPMSPPRDHWEDANPASWGGTPQYQPGTPARSYEAPTPGSGW
ANTPGGNYSDAGTPGESSPTYGNAPSPYLPSTPGMQPMTPNSANYLPGTPGGQPMTPGNI
GLDILSPAMAGGDNEGNWFFPDVLVNVMRPGEGPCIAIVREVLMDGSCKVALGSTGDGDI
ITAHPADVEAVRPRKFDKIKIMNGALRGITGKLIGIDGADGIVKMDDTFDVKILDMNILA
KLAVQ
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcacagagaagacgaatacgaagaggaggaggacgatgaagagttagatgaa
gaagaggatgacgactacagaaggagcacaggcgggaggaagcgaggcaggtccgatttc
attgacgatgcagccatagaggacgacgatgaggaggaatacagagatgaagaggacgag
gatgaggagctatacggcggtcggaagagaggctctgagttcttcgatcttgaggcccag
gttgatagtgctgacgaggaagaagaagacgaggatgctgaagatgattttattaatgat
gctggagctgacttacccgatgaaagtggtggtagaagaccacatcgtccattaaatatg
atgccagaggatcaggaggatgttgaagagatggaaaggcaagtttatgaaagatatgca
aaatcaagtcacattgaatatggtgaggatgccacagaggttgaacaacaagctctactc
ccgtcagtgaaggaccccaagttgtggatggtgaaatgtgctattggtcgagagcgtgaa
actgcaatatgcctcatgcaaaaatttatagacagacctgaactgcagattagatcagtg
gttgcattggaccatcttaaaaattatatatatgttgaagctgaaaaagaagcccatgtg
aaagaggcttgtaagggtttgcgtaccatatatagctcggctaaggtgatgctagttcct
atcaaagaaatgacagatgttctttctgttgaaagcaaaaccattgaaatttctagggac
acatgggttaggatgaaacttggaatttataaaggagaccttgccaaggttgttgatgtg
gataatgtacgacagaaagtaacagtaaagctaattccaagaattgatttacagcatctt
gctaataagttggaaaatagagacgtggttaaaaagaaggcatttgttcctccacctcgt
tttttcaacattgatgaagctagggagatgcatatccgtgtggagcgcaggagggacaaa
gatactggggaatattttgaaatggttgaaaatatgatgttcaaagatggttttctttat
aaaacagtgtctatgaaatcaatccgctctcagaatatacaaccaactttcgatgaactt
gagaaattccgaaaacctggtggtgacggtgatggtgatggcgatgctgatatggctagt
ttatcaactttaatttcaaatagaaagaaaggtcatttcatgaaaggagatgcggttgta
gttgtacggggagatttaaaaaatttgaaaggctgggttgaaaaagttgaagaagaaact
gttcatatcaagcctgagattgctggcttacctgaagctttggctttcaatgagaaggaa
ctctgcaaatattttaaattaggagatcatgtgaaagtggtctctggagtacaagaaggt
gcaactggtatggttgtgaaggttgatggccatgtactgataattgcatcagataccaca
aaagaagatatccgcgtttttgcagataacgttgttaagagctctgaagttacctctgga
atcacaaaaatgggggattatgagctgcaagatctcgttcttcttttcaacatgtccttt
ggtgtgataataagagtggagagtgaagcttttcaggttctcaagggagttccagataga
ccagaagttgtacttgttaggttgagggaaataaagagtaaacttgagaaacgtaccaat
gcacaagataatagaaaaaatatagtctctgtgaaggatattgttagggtccttgagggg
ccatgtaaggggaagcaaggtcccgttcaacacattcatagaggaatcctgtttattcat
gatcggcatcaccttgagcatgcaggctttatttgtgtgaaagcacaatcatgtattgtt
atcggtggaaacaatgataaacgcagtggtgataaatttgatgcaagatttggtttgaga
ccttcatctccttaccttcaatctccaagaaggccaccgagaggaccaacagatcgtggt
ggaaggcttaataggggtggtggacgaggacacgatgctttagttggaagaactattaaa
atacgttcagggccttttaagggatatcgtggtcgtgttgtggaggtcagtggtactttt
gttcgcattgaattggattcacaaatgaagatagttgcagtcaaaagggatgatatctca
gacacaccaggttctgcaaccccattccgcgaaccttctcgatatggttttggaagtgag
acacccatgcatccatctcgaactccacttcacccatatcaaactcctatgagagatgct
ggagcaactcccatccatgaaggcatgaggacacctatgcgtagccgagcatgggctccc
atgagtcctccaagagatcattgggaagatgcaaatcctgcttcttggggcggtactcca
caatatcagcctggaacccctgctcggtcatatgaagcaccgactccaggatctggttgg
gccaatactccagggggtaattacagcgatgctggaactcccggagaaagtagccctaca
tatggaaatgcgccaagcccttatcttccatccactccaggcatgcaaccaatgacacct
aattctgccaattatcttcctggaactccaggagggcagccgatgactccaggaaacatt
ggactggatattttgtcacccgcaatggcaggcggtgacaatgaaggaaattggttcttt
cctgatgttcttgttaatgtcatgaggccaggagaaggtccctgtatagcaatcgtccgg
gaggtgttgatggatggctcttgtaaagttgctcttggttcaaccggggatggggatata
atcaccgcccatccggcagatgtggaggccgtgaggcctaggaagtttgataaaataaag
ataatgaatggggcgctgcgcggaataaccggaaagcttattgggattgatggcgctgat
ggtatagtaaagatggatgacacgtttgatgttaagatattagacatgaacatattagca
aaattggctgtacaatga
DBGET
integrated database retrieval system
