Phalaenopsis equestris: 110025699
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Entry
110025699 CDS
T05601
Name
(RefSeq) pre-mRNA-processing protein 40A
KO
K12821
pre-mRNA-processing factor 40
Organism
peq
Phalaenopsis equestris
Pathway
peq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110025699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peq03041
]
110025699
Spliceosome [BR:
peq03041
]
Complex A
U1 snRNP components
U1 related factors
110025699
Complex B
110025699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
110025699
NCBI-ProteinID:
XP_020581974
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MASNPQASGPQPIRPSVVVSAGPPQNFGPPMPMQFRPVAPPSQQPLQFNPASAQQFRPNV
GISGQTQAIPMPYLQQNRPITAGALQTPQSMQLPNNIVPNLGGVGIPLSSSYTFATSYGQ
PLNSMNASSQYQPMIHLHAPVAPAGGPSWNASGAQTLPSVTPLMQPTQQPTIIGSSVVGT
NVQPGPAEQVTSDWQEHTAADGKRYYYNKKTRQSSWEKPFELMTPTERADASTEWKEFQT
PDGRKYYYNKVTKQSKWSIPEELKLAREQAEKGANQPAPAEPAVASLAPPAQSAIVEIPS
STTQNDSAPLSRSAVASPVSAPVSNQAALPPSGSSSVVDATAGTASSSSMGTAAPVSVSD
LNNPASSVIASVSGSSDILTTAADTMLGTTKSNNEDSSLPNLVNVTDGASVQDLEEAKRG
MPTTVKINITPLEDKSVDEEPFIYANKQEAKNAFKSLLESANVESDWTWEQAMRVIINDK
RYGALKTLGERKQAFNEYLGQRKKQDAEERRNRQKKVREDFTKMLEGCNDLTSSTKWSKA
ITMFENDERFSAVDRPRDREDLFDNYLVELQKKERAKAAEDHKHNIIEYRAFLDSCDFIK
ANTQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIQDLEKEEEEQKKIQREQLRRQERKNR
DAFRKLMEGDIAAGVLTAKTHWRDYCMKVKDSAPYLAVASNTSGSTPKDLFEDVAEELDK
QFHDDKALIKEAMKTGKITLTSSWTFDKLKASISDNDALKGLSEMNIKLVFDELLERQKE
RDEKEAKKRQRLIDGFSDLLYSIKDINASSNWEEFKSLFEDSQEYRSIGDESFAREIFED
YVSLLHEKAKEKERKRDEEKAKKEREREEKEKRREKERKEKEREREKDKVKERSRRDDLE
SEIVDVTNNHGMKDRKREKDKDRKHRKHHHSAGDDAGSEKDEKEDSKKSRRHSSDKRKSR
KHGYGTDSDSENRHKRHKKDRDGSRRNGAYEELEDGELGEDGEIQTIMASVQVATWCLLI
DNHICILMNGLNRRSSRFPRVQGEKILHYIFWTGPATVSRSNQSNWLVWFSKLWEKCRR
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaatccacaagcttctgggccacagcctataaggccatctgtcgtagtatct
gctggtccccctcaaaattttggtcccccaatgcccatgcagtttagacctgttgctcca
ccttctcaacaacctcttcagttcaatccggcaagtgcccaacaatttaggccaaatgtt
ggaatttccggtcaaactcaggcgattccaatgccgtaccttcaacaaaataggcccatc
acagctggtgcacttcagactccacaaagcatgcagttgccaaataatattgtgcctaat
ctaggtggagttgggatacctctttcttcctcatacacgtttgcaacatcttacggacaa
ccgctgaatagtatgaatgcctcttcgcagtatcaaccaatgatccatttgcatgcgcct
gttgcaccagctggtggaccttcttggaatgcatctggggctcaaaccttaccttctgta
acacccttgatgcaacccacacaacaacctaccattataggctcttctgtagtgggtaca
aatgtacaacctggtccggctgagcaggtaacatctgattggcaggaacatactgctgca
gatggaaaaagatattattataacaaaaagaccagacagtcaagttgggagaaacctttt
gaactcatgacgcctactgagagggctgatgcatctacagagtggaaagaattccagact
ccagatggtcggaaatattactataacaaagtgacaaagcagtcaaaatggtcgattcct
gaagaactcaagctagcccgtgagcaggcagagaagggagcgaatcagccagcccctgca
gaacctgcagttgcttctcttgcgccaccagctcagagtgctatcgttgagataccttct
tcaacaacacaaaatgattcggctcctttatcaagaagtgcagttgcaagcccagtttct
gcaccagtctcaaaccaagctgctttacctccttcaggatcatcatctgttgttgatgca
actgctggaacagcttccagttcttccatgggaactgctgctccagtttctgtttctgat
ctcaacaaccctgcttcctcagtgatagcttctgtttctggaagctcagatattcttact
actgcagcagatacaatgcttgggactacgaagagcaataacgaggattcatctctacca
aatcttgtaaatgttacagatggagcatctgttcaggacctggaagaagcaaaaagaggc
atgcctactactgtgaaaataaatattactcccttggaagacaaatcagttgatgaggag
cctttcatttatgctaataagcaggaggctaaaaatgcctttaaatcattgcttgaatcg
gccaatgttgaatcagattggacttgggagcaggctatgagagtcatcataaatgataaa
agatacggtgctctaaagactctgggggagaggaaacaggcatttaatgagtatttgggc
caaagaaaaaaacaggatgctgaggagaggcggaataggcagaaaaaggtccgggaggat
tttacgaaaatgttagagggatgtaatgacctcacttcatcaacaaaatggagcaaagcc
ataaccatgtttgaaaatgatgagcgcttcagtgctgttgaccggcctagagaccgtgaa
gatctgtttgataactaccttgttgaacttcagaagaaggaaagggcaaaggcagctgag
gatcataagcataatataattgaatatagagcttttctggattcctgcgactttatcaag
gcaaatacacaatggaggaaagtgcaagatcgtttggaggatgatgaaagatgttctcga
ctagaaaaaattgaccgtcttgagatttttcaggagtacattcaagatctagagaaggaa
gaagaggagcaaaagaagatacaaagggagcaattacgacgacaagagcgaaaaaaccga
gatgcatttcgcaagttgatggaaggtgatattgctgcaggcgttcttactgctaaaaca
cactggcgggattattgcatgaaggtcaaggattctgcaccctacttggcagtagcatca
aacacttctggttcaacgccaaaagatctatttgaagatgttgctgaggaactggacaag
cagtttcatgatgacaaggcactaatcaaagaggctatgaagacaggaaaaattactttg
acatcatcatggacatttgataagctgaaggcttctatatcagataacgatgcattgaaa
ggattatctgagatgaacataaagctcgtatttgatgaacttttggagcgtcagaaagag
agagatgagaaagaagctaaaaaacgccaacgtcttatagatggtttttctgaccttctt
tattcaatcaaggatataaatgcatcttcaaattgggaggaattcaaatcactttttgaa
gacagtcaagaatacagatctattggagatgagagctttgcaagggagatttttgaggac
tatgtttctcttttgcatgagaaggcaaaagaaaaggagcgcaaaagagatgaggagaag
gctaaaaaagagagagaaagagaagagaaggaaaaaaggagggagaaagagagaaaggaa
aaagaaagagaacgtgaaaaagacaaagtgaaggaacgatcaagaagggatgatttagaa
agtgaaattgttgatgtcaccaataatcatggaatgaaggatagaaagcgggaaaaagac
aaggataggaagcatagaaaacatcatcacagtgcaggagatgatgcaggctctgagaaa
gatgagaaggaggattctaagaagtcaagaaggcacagcagtgataagaggaaatctaga
aagcatggatatggcactgattcagacagtgaaaaccgtcacaagagacataagaaagat
agagatggatcccgtagaaatggtgcctatgaggaactcgaagatggggaacttggagag
gatggagaaatccaaaccatcatggcatcagtgcaagttgcaacctggtgtttattaatc
gacaatcatatttgcatcttgatgaatgggttgaaccggaggtccagccggttcccaagg
gttcaaggagaaaaaatacttcattatatattttggaccggaccagccaccgtttcacga
tcgaaccagtcaaactggttggtctggttttctaaactttgggaaaaatgcaggcgttga
DBGET
integrated database retrieval system