Phalaenopsis equestris: 110025893
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Entry
110025893 CDS
T05601
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110025893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peq03041
]
110025893
03009 Ribosome biogenesis [BR:
peq03009
]
110025893
Enzymes [BR:
peq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110025893
Spliceosome [BR:
peq03041
]
Complex A
U2 snRNP components
U2 related factors
110025893
Complex B
110025893
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110025893
Ribosome biogenesis [BR:
peq03009
]
Eukaryotic type
90S particles
Helicases
110025893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
SRP54
ABC_tran
nSTAND3
T2SSE
AAA_30
Flavi_DEAD
AAA_29
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
110025893
NCBI-ProteinID:
XP_020582238
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MSTERKRKVSLFDVVDEAAVSAKMSRINGSLAGGAAAALLPATINRWTGRTYSQRFFDIL
EKRKTLPVWQQKDEFLQVLRDNQTLILVGETGSGKTTQIPQFVLEAEFLGKRPMVACTQP
RRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPKTILKYLTDGMLLREAMADPLLER
YKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQGYFNGAPLMKVP
GRLHPVEIFYTQDPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKITKEVN
NLGDQVGPIKAVPLYSTLPPAMQQKIFEPAPAPLKDDGPPGRKIVVSTNIAETSLTIDGI
VYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFSND
LQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDG
NLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEA
KARFGHIDGDHLTLLNVYHAYKQNNEDPSWCFDNFINQRALKAADNVRQQLVRIMARFNL
KLCSTDFNSRDYYVSIRKALLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEW
VIYNEYVLTSRNFIRTVTDIRGEWLIDIAPHYYDLSNFPSCEAKRVLERLYNKREKDKQD
SKNRK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggagaggaagcgcaaggtcagcctcttcgacgtcgtggacgaagcagcggtc
tcggcgaagatgtctcggattaacggctcgttagctggtggcgctgcggcagcgcttctg
ccggcgacgataaaccgatggaccggacggacatactcacaaaggttcttcgatatcctc
gaaaagaggaagacacttcccgtgtggcagcagaaagatgagttccttcaagttctccgt
gacaaccagacccttattcttgtcggggaaactgggagtggcaagaccacccagatccct
caatttgttttggaagcggaattcttaggaaaacgtccgatggtcgcttgtacgcaacct
cgcagagtggccgcaatgtctgtttctcgtcgggttgctgaggagatggatgtaacaatc
ggagaagaggttggttatagtattcgattcgaagattgcagcagccctaaaactattttg
aagtacctaactgatggtatgcttttaagagaagcaatggccgaccctcttttggagagg
tataaggtgattatccttgatgaggctcatgagagaaccttggcaactgatgttcttttc
ggtcttcttaaagaggttctaagaaataggcccgatctaaaattagtcgtcatgagcgcg
actcttgaagctgagaaatttcaaggatattttaatggagctccgttaatgaaggtacct
ggaaggctccatcctgtagagatattttatactcaagatcctgagagagattatttggaa
gccgcaatcaggactgtagtacagattcacatgtgcgaaccccctggcgacattctcgtc
ttcctcaccggagaggaggagattgaggatgcctgtcggaaaattacaaaggaagtcaat
aatttgggtgatcaagttggtcctattaaagcagtccctctctattccactttgcctccg
gcaatgcaacaaaagatattcgagcccgctcccgctcctctaaaggatgatggtccgccc
ggacggaagatcgttgtatcgactaacattgcagagacttctctaactatagacggcata
gtttacgttatagatcccggtttctcaaaacaaaaggtttataacccgcgaattcgtgtc
gagtcattgttagtttctcctatttcaaaagcgagcgctcatcagagatcagggcgtgcc
ggcagaactcaacctgggaaatgctttagactctacactgaaaaaagttttagcaacgat
ctacagccgcagacctatcctgaaattctcagatcgaatctggcgaacactgttctaaca
ttgaagaaacttggcatcgatgatctcgttcattttgattttatggatccgcctgcaccg
gagactctgatgcgtgccttggaagttttgaactacttgggtgctttggatgacgatgga
aacttaacgaagttgggtgaaatcatgagcgaatttccgttggatccgcagatgtcgaag
atgcttgttgttagcccagagtttaattgttctaatgaaattctatctgtttcggcaatg
ctatctgtacccaattgctttgtgcggcctagggaagctcaaaaagctgctgatgaagca
aaagctcggtttggccacatcgacggagatcaccttactcttctaaacgtttatcacgcc
tacaagcaaaacaatgaagatccttcttggtgttttgataactttataaaccaaagggct
ctgaaggctgcggacaatgtgaggcagcaactagtgcgtattatggcgagattcaacctc
aagctttgcagcacggatttcaacagccgtgattattatgtaagcataagaaaagcattg
ctttcaggatactttatgcaggtagctcatctggaaagaactgggcattacttgacagtg
aaggataatcaggttgttcatcttcatccttcaaactgcttggatcacaagcctgaatgg
gtaatctacaatgaatacgttttaaccagcaggaactttattcgcacagtcacagatatt
cgtggcgagtggttaatagacatagctccacactactacgacctcagcaacttcccctca
tgtgaggcaaagcgagtactggagaggctgtacaataagcgtgagaaagacaaacaagac
agtaagaacaggaaataa
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