Phalaenopsis equestris: 110026272
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Entry
110026272 CDS
T05601
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
peq
Phalaenopsis equestris
Pathway
peq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110026272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peq03009
]
110026272
Ribosome biogenesis [BR:
peq03009
]
Eukaryotic type
Pre-60S particles
RNases
110026272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
APOBEC3
Motif
Other DBs
NCBI-GeneID:
110026272
NCBI-ProteinID:
XP_020582813
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MEELVTGTIDNIFSGADKEVLVDVVRLIQKQGLNSSRGNWKEFLNSYDRKLGDSLSDPSK
RSADVLTAFLKSFNQTKDLMFIGKIFRHFRDQRAFEMHIKNSLNEETPEQRLVRLTMEHP
QYRRNYYCDAYNTDWIVVPLGDMSKVMKSSSMLSVDCEMVLCNDGTEEVVKVCAVDNKLN
VKLNKIVNPNKSISDYRTEITGVSAKDLEGVTCSLVDIQGSMKKLLKHGTILVGHSAHND
LRALKIAHHRVIDTSYIFKYSEVRLTYTPSLNSLCKAVLGYEVRKEGEPHDCRIDAEAAM
KLVLAKLGHGFDEPLKIDKRVPDFSHAMLLHKIPVEVPCQELKKVFPRDFYVDIKADLKV
RGPFYSTHAIFKDDYEASIAFRRIDGQERKDCEGRPQKLVCLKLSTGQLTSFYVCKTMSS
SPPEDSKRQRISSAIDANEGRACSSEPCKHAEEIFRLKQQLSAREDEIFSLQRILSDLTR
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcgttaccggcaccattgacaacatcttctccggcgccgacaaagaggtt
cttgtggacgtcgtgcgattgatccaaaagcaggggttgaatagctctcggggaaattgg
aaagaatttctgaactcctacgacaggaaactgggtgattctttgagtgatccttcaaaa
aggtctgcggatgttcttacagctttcctaaagagcttcaatcagaccaaagacttgatg
tttataggtaaaatattcaggcactttagggatcagagagcctttgagatgcatattaag
aattccctaaatgaagagacccctgaacagaggctagttcgattgacaatggagcacccg
cagtacaggagaaactattattgtgacgcttataatacggactggattgttgtgccactg
ggcgatatgtccaaggtaatgaagtcaagcagcatgctttctgttgattgcgagatggtt
ctatgcaatgatggtaccgaggaggtcgtgaaagtatgcgcagtggataataaattaaac
gttaaactaaacaaaattgtgaatcccaacaaatctatttctgattatagaacagagata
actggtgtttcagctaaagatttggagggagttacatgctccttggttgatatacagggt
tctatgaagaagcttttgaagcatggaactattctagttggtcacagtgcacataatgat
ttgcgagcattaaaaattgcacaccatcgagtgattgacacatcatacatcttcaagtac
tcggaagttcgtcttacttatacaccttcactgaacagtctgtgtaaggctgtgctgggc
tatgaagttcggaaggaaggcgaaccacatgattgccgaatagacgcagaagctgccatg
aagctagttcttgcgaagctcgggcacggatttgacgagcctcttaaaattgataaaaga
gtgcctgatttcagtcatgcaatgcttctgcacaaaattccggttgaggttccttgtcaa
gaactgaagaaagtatttcctcgagatttttatgttgatataaaggctgatttaaaagtt
cgaggtcctttttattctacacatgctattttcaaggacgattatgaggcaagcattgct
ttccgaaggatagatggacaagagaggaaggactgtgaaggccgtccccagaaacttgta
tgtctaaagctcagtacaggacagcttaccagcttctacgtctgcaaaactatgtcttcc
tccccacctgaagattcaaagaggcagagaatttcttccgccattgatgccaatgagggc
cgagcttgctcatccgaaccctgtaaacatgcagaagaaatcttcagactgaagcagcag
cttagtgccagggaagatgaaatatttagcctgcaaaggattctttcagatcttactaga
ggttag
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