Phalaenopsis equestris: 110026997
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Entry
110026997 CDS
T05601
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
peq
Phalaenopsis equestris
Pathway
peq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110026997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110026997
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110026997
mRNA degradation factors
5'-3' decay
Decapping complex
110026997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_Vps41
WD_LRWD1
DUF445
Motif
Other DBs
NCBI-GeneID:
110026997
NCBI-ProteinID:
XP_020583904
LinkDB
All DBs
Position
Unknown
AA seq
1394 aa
AA seq
DB search
MASHGGNSNQFDMQKLFKPPNPSLNANPNPNSNASFLPPSSYAAGVPHLPYPTVQPPGAF
SYATPTPPFHHHPFIHYPQENLYRPGVSYPVQPSIPPNPNPGLNNSGQNPGARLMALLGN
SPPAQLEFAASMPPASAPSELPATLYAVPSAPPAVMAVAQAQPARLASTKMPRGRYLGGG
ERAVHDVDSRLPGETQLPQLEVTPITKYTSDPGLVLGRQIAVNKTYICYGLKLGAIRVLN
INTALRSLLRGHSQRVTDMAFFGDEVHLLASASVDGKIFVWKVDEGPDHEDKPQISGKLV
LAIQLIGDREYLPRICWHSHKQDILVVGIGNNVLRIDIPKVGRGTEFSADDPLKCPLEQL
VDGVQLVGRHDGEVSDLSILQSMTTRLASASNDGTVKIWDDRKSLPLVTLRPHEGQPVHS
VSFMTPPQCPDHIVLLTSGPLNRELKLWTSSAEEGWLLPSDSESWRCNQTLELKCSSEHQ
VEEAFFNQVVVMPQEGLILLANAKKNAIYAVHIDYGPHPAATCMDYIADFNVTMPILSLT
GTSDIYPDGEHVVQVYCVQTQAIQQYALNLVQCLPPVDNLLLAKDPCISHVYDGISSTGF
SASEISRGTSDIPFAAASPIRSVGVSNSENMVVCPPNLLSSDANNIPELASSNVDIHPSA
PPLPSVGSDNLHPTSSPDPLDLDLSQRFTGSKVALKGLEHGKSLGERDVYQEVSDYQAEQ
GEHDGAVNLPNRPLTNDNFGGDNMKTGPSDTSMIQNSPLMFKLGGTHLVTPLEILSGVKS
SSETAANQRIDEVKLLDLIGNNDLKHAEVIKVVDESVLDKSEEFSSQKEANNAYNESKDQ
PSSSSVSNIMNDKPKEGDAFNAGLYNGIEVQVGDYGSAAGAVEQSSGNIEETVLKNTTDL
SQRETGFFDIPASKAAKGKKQKAKQAQVSGSSSPSSSPFNSIDSSNEHRSGMFAPPTEAS
YSQIMSIQDALNQILSMQKEINKQISTAVGGPIAKEGKRVETALGRSMEKNVKANVDALW
ARFLEENAKREKAERDNLQHITSLISNFINKDLPAVFERMLKKEIPSIGTSITRSITPIL
EKTISSTIVDSLQRGLGDKAVNQLEKSVSSKLDTTVTKQIQVQFQTAGKQALQDALRSSL
ESSLIPAFEQSCKSMFEQVDAAFHKGMSEHNSAALQQFESTHTPLALTLRDAINSASSVT
QNLTSELADGQRKLLALASGNAKSLNPMVVQQSNSPMVNLPEMLALSVQQVEAPLDPTKE
LSRLISEFKYDEAFTVALQRSDVSIVSWLCSQVDLHRICSMMPLPLNQGVLLALLQQLAC
DISNDTARKLGWMTDVAAAINPSDPIITLHVRPIFEQVYNILAHQRSLASMTPTEASSIR
LIMHVLNSVLMSCK
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcatggtggcaattctaatcagttcgacatgcagaagctcttcaagccccct
aatccctcgcttaatgctaaccctaaccctaactctaacgcttctttcctccctccctcc
tcttacgcagccggtgttcctcatcttccctatccgacggtgcagcctccaggcgccttc
agctacgcgacgcctactcctccgttccatcaccatccctttatccactaccctcaagaa
aacctttaccgtcccggtgtttcttatcccgttcaaccgtcgatcccacccaaccctaat
cctggtctgaataactcaggacagaatccgggtgcccgactcatggccctcctcggaaat
tcccctcccgctcagctcgaatttgccgcctcgatgccaccggcttctgcaccgtcggag
cttcctgcgacgctctacgcggttccttctgctccgccggctgttatggcggttgctcag
gcacagccggcgaggttagcgagcacaaagatgccgagggggaggtatcttggaggaggg
gaacgagctgtgcacgatgtagactcaaggttgccgggggagacgcagctgccgcagctc
gaggtcacgccgatcacgaagtatacgtcggacccggggcttgtacttggaaggcagatc
gccgttaacaagacctacatctgctatgggcttaagcttggcgcaatcagggttctcaac
atcaacactgcattgagatcactcctccggggccattcacagagggtgactgacatggct
ttctttggagatgaagttcaccttttagcaagtgcaagtgtagatgggaagatttttgta
tggaaggttgatgaggggcctgatcacgaagacaagcctcaaatcagtggaaaacttgtt
ctcgctattcaactgataggagacagagagtatcttccaagaatttgttggcactcacac
aaacaagacattttggttgttggaatcggtaacaatgtattgagaatcgatattccaaaa
gttgggagaggcactgaattttctgcagatgatcctctcaaatgtcctcttgaacaactg
gttgatggggtgcaattggtaggcagacatgatggagaagtttcagatttgtcaatatta
caatcgatgacaacccgcttagcttcagcttcaaatgatggcacggtaaaaatatgggat
gatcggaagtcactgccccttgtgacattgaggccacatgaaggccaaccagtccattca
gtttcattcatgacgcccccgcaatgccctgatcacattgttcttctaacttcgggtcca
ttgaaccgtgaactgaagttatggacttcctcagctgaagaaggctggttattacccagt
gattctgaatcatggagatgtaatcaaacattggaattaaaatgttcgtcagaacaccaa
gtagaggaggccttttttaatcaagtcgttgttatgcctcaagaaggccttatattactt
gcaaatgctaagaagaatgctatatatgctgtccatattgattatggtccgcatccagca
gcaacctgcatggactatattgctgactttaatgttacaatgcctattttgagtctcaca
ggaacaagtgacatctatcctgatggtgaacatgtggtgcaagtttactgcgtccaaaca
caggctattcaacaatatgctttgaatttggtacagtgtttgccacctgttgataacctt
ttattggccaaagacccctgtatttctcatgtttatgatggaattagttcaacaggattt
tctgcatcagagatttcacgtggtactagtgatattccatttgctgctgcttcacccata
cgttctgttggtgtaagcaactctgagaacatggttgtttgtcctccaaatttgttatct
tcagatgctaacaatattcccgagttggcttcatcgaatgttgatattcatccttctgct
cctccacttccaagtgttggcagtgataatttacaccctacttcatcccctgatccttta
gatttggacctctcacagaggtttactggttctaaagttgcattgaaaggtttagaacat
gggaaatcacttggggagcgtgatgtttatcaggaagttagtgattatcaagctgaacag
ggagaacatgatggggctgtaaacttgcctaatcgtcctttgactaatgacaacttcgga
ggggataacatgaaaactggtccaagcgatacatctatgattcagaattctcctctaatg
ttcaagttgggtggaactcacttggtgactccattagaaattttgtcaggtgtgaagtct
tcatctgaaactgctgctaatcagagaattgatgaagtgaagcttctagatctgatcggc
aacaacgatttgaagcatgctgaagtaattaaagtcgtggatgagagtgtgctggataag
tctgaggaattcagttctcagaaagaggcaaataatgcttataatgagagtaaggatcaa
ccgtcaagttcgtcagtttcaaatatcatgaatgacaagccaaaagaaggtgatgcattt
aatgcaggtctttataatgggattgaagttcaggtgggtgattatggtagtgctgctggt
gcggttgagcagtcttctggtaatattgaggaaactgtcctgaaaaacacaacagatctt
tctcaaagagaaactggattttttgatattccagcatcaaaagctgcaaaaggaaagaag
caaaaagccaagcaggctcaagtatcaggctcatcatcaccgtcttcaagtcctttcaac
tccattgattcttcaaatgaacatcggagtggcatgttcgctcctccaacagaggcttct
tattcccaaattatgtcaatccaggatgctttaaaccagattttatctatgcagaaggag
ataaataagcagattagcacagcagtgggtggcccgatcgcaaaagagggaaaaagagtt
gagacagctttgggccggagcatggagaaaaatgtgaaggctaatgttgatgccttgtgg
gctcgttttcttgaagaaaatgcaaaacgtgagaaggctgaaagagataatttgcagcat
attacaagtttgatctcaaattttatcaacaaagacttgcctgctgtttttgaaaggatg
ctaaagaaggagataccttcgattgggacatcaataactcgttcaattactcctatactt
gaaaaaacaatttcttcaactatagttgattcgctccagagaggtctgggtgacaaagca
gtgaaccagctggaaaaatctgtgagttctaaacttgatacgacagtaacaaaacaaatt
caagtacagttccagacagcaggcaaacaagcccttcaggatgctttacgttccagcttg
gaatcctctttaattcctgcatttgaacaatcatgtaaatcaatgtttgagcaagtcgat
gctgcctttcacaagggtatgagtgaacataattctgctgcattgcagcagtttgaatcc
acacatacgccattggcgcttactttaagggatgcaattaattctgcttcatctgttacc
caaaacttaacaagcgagttggcagatgggcagcgcaagcttttagctcttgcttctgga
aatgcgaagtccttaaatccaatggtagtgcagcaaagcaatagtccaatggtcaacctc
ccagaaatgcttgctctgtctgttcagcaagtcgaggcgcctctcgaccccacaaaagaa
ttgtcaagactgatttctgaattcaaatatgacgaagcattcactgtagctctccaaagg
agtgatgtctccattgtgtcctggctatgctctcaagttgatttgcacagaatatgttct
atgatgccacttcctctgaaccaaggcgtgctcctcgcacttctgcagcagctggcatgc
gacattagcaatgatactgcgaggaagttgggatggatgactgatgtagctgctgccatc
aatccatcagacccgatcatcacattacacgtacgacccatatttgagcaggtttacaac
atactcgcacaccagagatcgctcgcttcgatgacgccaacggaagcatcaagcattcgg
ctaataatgcatgtcctaaattccgtgctgatgagttgtaaatga
DBGET
integrated database retrieval system
