Phalaenopsis equestris: 110027125
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Entry
110027125 CDS
T05601
Name
(RefSeq) LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
peq
Phalaenopsis equestris
Pathway
peq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110027125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110027125
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110027125
mRNA degradation factors
5'-3' decay
Decapping complex
110027125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_TEP1_C
DUF2594
Motif
Other DBs
NCBI-GeneID:
110027125
NCBI-ProteinID:
XP_020584085
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MASSGGSPGPSPNSNPTASPTFDVQKLFKPPPSSSNPNPNPIPRGASPFLPPPSSYPAPL
LPSTSPSPSPSPSAPLSAFSYPPTTPPFQHRPFLHYPQAPSPIPVASPNPNPNAGARLMA
LLGTAQPANLESAISMPSSTSPSQFSAAPGNPPILHPPPPAMLQPDPARVPSSKLPRGRR
LAAGDRAVYDVDSRLPGESQPPQLEVTPITKYISDPGLVLGRQIALNRVYICYGLKLGAI
RVLNINTALRSLLRGHTQKVTDMAFFAEDVPLLASASIDGRIFVWKINEEFDEDGKPQIT
GKIVLAIQLIGAGEGEPYHPRVCWHPHKQEVLVVGVGNYLLKIDTIKVGRIGQFSADEPV
KCPIDKLIDGVQHIGKHDGEITDISMSQWMTTRLASASKDGKIKIWEDRKVMPIAILTPH
DNQPVSSVAFMTSPERPDHIILVTAGPLNRELKIWVSASEEGWLLPSDSESWKCNQTLDL
RSSSEPRHEEAFFNQFVVLSRASFILLANAKKNAIYALHVDYGPNPASTRMDYIADFTVT
MPILSFTGTSDWLSDVEQIVQVYCVQTQAIQQYALDLSQCLPIPVDNEGLEKLASNSVHD
GPISEGLSAPHSSSGATGYDGPLANFSPKPILTNRSEDNKYQAVSGTAEATVVHEHAASN
VEAAISAPQLSNIDRTTGDVAASSPSLPLNRDLSEKLHVMQGVSGSGEQEKLLSAGSVDS
QGHDSMVDKTLDAVVTNAPDVPPVETSGKEKNKAVIETIPMVPNAHTLFKPDSKQTHLVT
PSEILSGVIPPESSFPNHGLRSEESTALKVSDKNGIGHGDGKVVGDRAFTKHDSEKEPHE
ALTEQRKLVKHPSSEPINFAERNAFKTEEHDAEKIHTPDIIGSGKLDVPAGSGKEAVEET
KRKDVPLRDTSPVGTNSQPISDLKLNRPKENRSQASALLSPASSPFASDSLVEHGPIIGN
HSTDVLSQLRLIQEQLNQLVTNQKEIEKQMAEVVSAPVVKEGRRLEAALGRSMEKSIKAN
IDSLRAHIQEENAKQEKNERENMQQLTSLITNCLSKXPAAVERTIKKELSAVGQVLARAI
TPNIEKCISSAMGDSFQRGVTDKTVSQLEKTIGSKLEASLARQIQSQFQTSGKQTLQDTL
KSTLESSVVPAFEKSCRGLFEQIDEAFQKGLTDHVAAAQQQYESTHTQLALTLRDSINSA
SSITQNLVSELADGQQKLLALFASGNSKANPVAMQQSNGPLGGHPDIALSVQQIEAPVDP
TKELTRLISERKFDEAFTLALQRSDVSIVSWLCSQVDLHGLCSMAPLPLSQGVLLALLQQ
LSCDISTETQRKLGWMTDVSVAINPTDPMITSHVRPIFEQVYNRLLHQRTLQTTTVAEAS
SIRLIIHVINSMLMSCK
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcaggtggcagccccggccctagccctaactctaatcccacggcttccccc
accttcgacgttcagaagctcttcaaacctccaccatcttcctccaaccctaaccctaat
cctattccgaggggtgcaagccccttcctcccacctccctcttcctatcccgctccgcta
ttaccatccacctcgccatcgccatcgccatcgccgtcggcgcctctcagcgccttctcc
taccctcccacaactccgccgttccagcatcgacccttccttcactatcctcaggctccc
tcccctattcctgtcgcttcccccaaccctaatcctaatgcaggcgcacgcctaatggca
cttctcggcacagcccaacctgcaaacctcgagtcagccatctcgatgccatcgtcaacg
tcgccgtcacagttctctgcggcgcccggtaaccctccgattctccatccgccacctcct
gccatgctgcagccggatcctgcgagagttccaagcagcaaattaccgcgggggcgccgc
ctggctgccggggatcgtgcggtgtacgatgtggactcaaggttgccaggggagtctcag
ccgcctcaactggaggtgacgcctattactaagtatatatcggatccaggccttgtgctt
gggcggcagattgcacttaaccgtgtgtacatctgctatgggctcaagcttggagctatt
cgcgtgcttaatatcaacacggcacttcgatctttgcttcgagggcatactcagaaagtt
acagacatggctttctttgctgaagatgtaccattgttggccagtgcaagtatagatggt
agaatttttgtgtggaagattaatgaggaatttgatgaggatggtaagcctcagataact
ggaaaaattgttttagctatacaacttataggtgctggagaaggagagccttatcatcct
cgagtttgttggcatcctcataaacaagaagttttagttgttggagttgggaactatctg
ctaaaaattgatacaataaaggttgggagaattgggcagttttctgcagacgaacctgtt
aaatgccccattgataagcttattgatggagtgcagcatattggtaaacatgatggagaa
attacagatatttccatgtctcagtggatgacaactcgtttggcttcagcatcaaaagat
ggaaagataaaaatttgggaagatcgcaaggtgatgcccattgccattctcactccacat
gacaaccaacctgttagctcagttgcctttatgacatcgcctgagcgccctgatcacata
attcttgtaactgcgggcccattgaacagagaactgaagatatgggtctctgccagtgaa
gaaggttggcttttaccaagtgattctgagtcatggaaatgtaatcagaccttagacttg
agaagttccagcgagcccaggcatgaggaggcatttttcaatcaatttgtagtgctgtct
cgagcaagttttatattactggcaaatgcaaagaaaaatgctatctatgcgttacatgtg
gattatggtccaaacccagcctcaacacgtatggactacatagcagattttactgttaca
atgccaatattgagttttactggaacaagtgactggttgtcagatgtggaacagattgtt
caagtttattgcgtgcagacacaggctattcagcagtatgcattggatttgtctcagtgc
ttgccaattcctgttgacaatgaggggttggagaaacttgcctctaattctgttcatgat
ggccccatttcagaaggattatctgctccgcattcatcttcgggagctacaggttatgat
gggcctcttgcaaatttttcacctaaacctattcttacaaaccgctctgaagataataaa
taccaggcagtttcaggtaccgcagaggctactgttgttcatgaacatgctgcttcaaat
gttgaagcagccatatctgcccctcaactttcaaacattgatagaactactggcgatgtt
gcagcttcttccccttccctcccattgaatcgggatttgtcagagaaacttcatgttatg
caaggcgtctcaggttctggtgagcaagagaaattacttagcgctggtagtgttgatagc
caaggccatgattctatggtggacaagacattggatgctgtagtaacaaatgctcctgat
gttcctcctgtcgaaacctctggtaaggaaaaaaacaaggctgtaattgaaactattcct
atggtgccaaatgcccatacattgttcaagccggatagtaaacaaacacatttggtaact
ccatctgagatattgtcaggtgtcattcctcctgaaagcagttttcctaatcatgggctt
agaagtgaggagtcaactgctctgaaggtaagtgataaaaatggtataggccatggggat
ggtaaggtcgttggtgatagggctttcaccaagcatgattctgaaaaagaacctcacgaa
gccctcacagaacagaggaaattagttaagcatccttcttcggaaccaatcaattttgct
gagagaaatgcctttaaaacagaagagcatgatgcagagaaaattcacaccccggatatt
attggttctggaaaattagacgtgcctgcaggttcaggcaaggaagctgttgaagaaacc
aaaagaaaagatgtgcccttaagggatacgtctcctgttggtacaaattcacaaccaatt
tctgatttaaaattaaatagacctaaagaaaatcgatctcaagcatcagctttgttatca
cctgcatctagcccctttgcctcagattctttagttgagcatgggcctatcatcggcaat
cattctacagatgttttatcccagcttcgtctcattcaggagcagttgaaccagttagtg
acgaatcaaaaggagatagagaagcagatggctgaggttgtgtctgctcctgttgtcaag
gaagggagaaggttggaagctgctctcggccggagcatggagaaatctatcaaggccaac
attgattctttgcgggctcatattcaagaggaaaatgccaaacaagagaagaacgaaaga
gagaacatgcagcaattaacaagcctaattacgaactgccttagtaagngtcctgctgca
gtagagaggacaattaagaaggagttatctgcagtgggccaggtgttggctcgtgcaatc
acccctaacattgaaaaatgcatttcttcagctatgggtgactcttttcagagaggggtc
acagataaaacagttagtcagcttgagaaaactatcggttcaaagctggaagcttcattg
gcgaggcaaattcagtcacaatttcaaacttcaggcaaacagaccctgcaggatacactg
aaatctactctggaatcatcagtggttcctgcgtttgagaaatcttgcagagggctgttt
gagcagatagatgaagccttccagaaaggtttaacggatcacgtggctgcggctcagcag
caatatgaatccacacatacccaacttgcactgactttgagggattcaattaactctgca
tcatctatcacccagaaccttgtcagtgagttagctgatggccagcaaaagctcttggcg
ctctttgcttcaggaaattcaaaagctaatcccgtagcaatgcagcagagcaatggtcca
ttgggtggtcatcctgatattgcattgtctgtccaacagattgaggcccccgttgatcct
acaaaggagctcacaagactgatatctgaacgcaaatttgatgaagcatttacattagct
ctccagagaagtgatgtttccattgtatcttggttatgttcacaggtagatctgcatggg
ctttgttctatggctccgcttcctctcagtcaaggcgtcctgcttgcccttcttcagcag
ctatcctgcgacatcagcactgaaactcagcggaagctcggctggatgacggatgtttct
gttgccataaatccaacagatccaatgatcacatcgcacgttcgacccatatttgagcag
gtttataacagacttctgcaccagagaacactccagacaaccacagttgctgaagcttca
agcattcgattaatcattcatgttataaattctatgttaatgagctgtaaatga
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integrated database retrieval system
