KEGG   Phalaenopsis equestris: 110027135
Entry
110027135         CDS       T05601                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
peq  Phalaenopsis equestris
Pathway
peq03013  Nucleocytoplasmic transport
peq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110027135
  09122 Translation
   03013 Nucleocytoplasmic transport
    110027135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:peq03019]
    110027135
   03041 Spliceosome [BR:peq03041]
    110027135
Messenger RNA biogenesis [BR:peq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110027135
Spliceosome [BR:peq03041]
 Complex C
  Other components
   EJC/TREX
    110027135
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110027135
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_Vps41 eIF2A Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WD40_RFWD3 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 WDR90_beta-prop_4th B-prop_COPA_B_2nd Beta-prop_NUP159_NUP214 Beta-prop_IFT80_2nd Beta-prop_Nup120_160 PROPPIN Beta-prop_SCAP DUF7099 WD_LRWD1 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 110027135
NCBI-ProteinID: XP_020584097
LinkDB
Position
Unknown
AA seq 314 aa
MEETPVNFKNLGIKEFQGHKKKVHSVAWNCSGTKLASGSVDHTARVWNIDAHGHGKVKDI
ELKGHTDSVDQLCWDPRHTDLLATAAGDKTVRLWDARSGKCSQQAELSGENINITYKPDG
THLAVGNKEDELTILDVRKFKPIHRRKFNYEVNEIAWNTTGELFFLTTGNGTVEVLAYPS
LKILHTLVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTIS
FNHTGEFIASASEDPFIDISNVQTGRSVHQIPCKAAMNSVEWNPKHNLLAYAGDDKNKYQ
ADEGVFRIFGFEST
NT seq 945 nt   +upstreamnt  +downstreamnt
atggaggagacgcccgttaatttcaaaaacctaggtataaaagagttccagggccacaag
aagaaggtgcattctgtggcttggaactgctccggcacgaagctagcctcgggatctgta
gaccacactgcacgtgtttggaatatcgatgctcatggccacgggaaagtgaaagatatt
gaactgaaagggcacacagatagtgttgatcaactgtgttgggaccctaggcatactgat
ttacttgcgacagcggcaggagataaaactgtccgtctctgggatgctcgaagtggaaaa
tgctctcaacaggctgaactcagtggagaaaacatcaatattacgtacaaacctgatggc
acacacctggctgttggaaacaaggaggatgaattaacaatattggatgttaggaagttc
aagccaattcacaggcgaaagttcaattatgaggtaaatgagattgcatggaatacaact
ggagagctattttttcttacaaccggaaatggaactgttgaggtgcttgcctatccatct
ttgaagattcttcacaccttagtggctcacacagctggttgctattgtattgccattgat
ccaatgggaagatactttgccgttggaagtgctgattcattggttagcctgtgggacatc
tcagaaatgctgtgtgttcgaacattcacaaaactcgaatggcctgtgagaaccatcagc
ttcaaccacacgggagaattcattgcttctgctagtgaggatccattcattgatatttca
aatgtgcaaactgggcgatctgttcatcagattccatgcaaggctgctatgaacagcgtg
gagtggaaccctaagcataacttacttgcttacgcaggagatgacaaaaataagtatcag
gctgatgaaggtgtctttcgcatttttggttttgagagtacttga

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