KEGG   Phalaenopsis equestris: 110027352
Entry
110027352         CDS       T05601                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
peq  Phalaenopsis equestris
Pathway
peq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110027352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:peq03019]
    110027352
Messenger RNA biogenesis [BR:peq03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     110027352
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 110027352
NCBI-ProteinID: XP_020584397
LinkDB
Position
Unknown
AA seq 304 aa
MTPTEGLKPESGLAAEIEVEAYRLLFPLQYYERHLAESVRPDSRALGRARDTTIALGPVT
SADGSALVKIGDTTMLAAIKLEVMTPCIGSPDEGSVAVDFQMPPICSPVVRPGRLAELAP
VIAKQLSDVIMSSGMLNLKELSLISGKAAWMAYLDIYCLNADGSLFDAALLSATAAFSHL
QIPLVSLNDDGKVITVSEELKIKAVEPINKENRKLTIAIVPFSLTCIVHGKYILADPTSE
EESVMDTHVTVVLDSKERLVSLYKAGGAILLHASVVKDCIALARLRVEELSEILRESLSA
MEVD
NT seq 915 nt   +upstreamnt  +downstreamnt
atgacgccaaccgaaggccttaagccggagtctggcctcgcggccgagatagaggtggag
gcctaccgcctcctctttcccctccagtattacgagcgccatcttgcagagtccgtacgc
ccagatagccgagctcttggccgcgctagagataccaccatcgccctcggacccgtaact
tcagccgatggatctgctttagtaaaaatcggagatactaccatgctggcagctattaaa
ctggaagttatgactccttgtattggctctcctgatgagggaagcgtagctgttgatttt
caaatgccgcctatttgttctcctgttgttagaccagggaggctggcagagcttgctcct
gttattgccaagcagctttctgatgtcataatgagttctggcatgttaaacttgaaagag
ctctctttaataagcggaaaggcggcttggatggcctacttggacatttattgtcttaat
gctgatggctctctttttgatgctgcattgctctcagcaacagcagctttttctcacttg
cagattccgttagtttcattaaatgatgatggaaaagtgattactgtgtctgaagaactg
aaaatcaaagcagtagagccgattaataaagaaaatagaaagctcactattgcaattgta
ccgttctcactaacatgcatagtccatggtaagtatattttggcggaccccacttcagaa
gaagaatctgtaatggacacccacgttacagtggtgttagattcaaaagagagattggtg
tcattatacaaagctggtggagcaatccttttgcatgcttctgttgtgaaggattgcatt
gcgcttgcaaggctcagagtggaggagctaagtgaaattttgagggaatcactctctgca
atggaagttgactag

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