Phalaenopsis equestris: 110028089
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Entry
110028089 CDS
T05601
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
peq
Phalaenopsis equestris
Pathway
peq03030
DNA replication
peq03420
Nucleotide excision repair
peq03430
Mismatch repair
peq03440
Homologous recombination
peq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110028089
03420 Nucleotide excision repair
110028089
03430 Mismatch repair
110028089
03440 Homologous recombination
110028089
03460 Fanconi anemia pathway
110028089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
peq03000
]
110028089
03032 DNA replication proteins [BR:
peq03032
]
110028089
03400 DNA repair and recombination proteins [BR:
peq03400
]
110028089
Transcription factors [BR:
peq03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110028089
DNA replication proteins [BR:
peq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110028089
DNA repair and recombination proteins [BR:
peq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110028089
MMR (mismatch excision repair)
110028089
DSBR (double strand breaks repair)
HR (homologous recombination)
110028089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
zf-CCHC_2
DUF223
zf-CCHC_5
zf-CCHC_4
CDC24_OB3
zf-CCHC_3
Hormone_4
Motif
Other DBs
NCBI-GeneID:
110028089
NCBI-ProteinID:
XP_020585467
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MASVNLTSGAIAKISQGLGDKLQPVLQVVEIRLVNTQQSSAERYRMLLSDGVHHQQGMLA
TQMNGIVKSGQLQKGSIVQLSEFICNTIQNRRIIIIISLQVLVEKADMIGDPKNFDSGNP
IPQNRAAGSGQPSSINQPGISIENVQHHGSSRANGPDAGQHAISDASFPRQESAVNNQSY
GGSFAGGSIPMRNMNNTNSLHPKAESASMCFAESNQIASMQQKRFPGPSNGGFQPPGRVT
YQQPPPMYANRGPISKNEAPARIIPIAALNPYQGKWTIKARVTAKADIRHYNNARGEGKV
FSFDLLDSDGGEIRVTCFNAVADQFYDQIEVGRIYLISKGTLRPIQKSFNHLNNEYEIML
ESASTIQPCLDEDMSIPRQQFNFRAIGEIESMENNSMVDVIGIVTSXNPAGTIMRKNGTE
THKRTLQLKDIKSVEITLWGNFCNTEGQKIQAMCDSGVFPVLAIKAGRVSDFSGKSIGTI
SSSQLLIDPDIPEAFQLKQWYDNEGKNHTALSISREAAVTGRMDVRKTVSQIKDEGLGRS
EKPDWITVKATVSFIKVDNFCYTACPLVVSDRQCXQKVNNYSDGTWHCDRCDQSFPECDY
RYLLQFQIQDHTGITWVTAFQECGEQILGISAKELYFLKYEHQDELKFAEVVRRVLFSQY
LFKLKVKEETFSDEQRVKSTSIKADRVNPASESRFLLGIIERLSGEDAPPSMYGSYACGA
GMPASEYSHAELNHGRLSMTDFDRYKMETSSQYMNQYGGISGNTMSREVPSFCNNCGLSG
HNFQNCPRSLNREAQSVGGGGFPNWSSTSAMDGGNSSNVCFKCKQTGHWARDCPGQGTIS
SGFGGRNISSSSVGGPHSQAIYGKQYVGGF
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggttaacctaacgagtggcgcgattgcgaagatatcgcaagggttaggggac
aaactgcagcctgttcttcaagtagtggagatccggctggtgaatacccaacagagctcg
gcggagaggtaccggatgcttctttctgacggcgtacaccatcagcaggggatgcttgcg
acgcagatgaatgggattgtcaagtctgggcagctgcagaaaggatccattgttcaattg
agcgaatttatctgcaacaccatccaaaatcggaggatcatcattataatcagcttgcaa
gttttagttgagaaggccgatatgattggggatccaaaaaattttgattctggcaaccct
atcccacaaaaccgtgctgctggttctggacagccatctagcataaaccaacctggtata
tccatagaaaatgttcaacatcatggtagttctcgagcaaatggtcctgatgctggccaa
catgccatttcagatgcttcatttcccagacaagagtcagctgtaaacaatcaatcttat
ggtggctcctttgcaggcggttctattccaatgaggaacatgaataacacaaattccttg
caccctaaagctgaatctgcttctatgtgttttgcagaatcaaaccaaattgctagtatg
cagcaaaaaaggttcccaggtccatcaaatggcggatttcaacctcctggtagggttacg
tatcagcaacctcctcctatgtatgctaatagaggtcctatttctaagaacgaagcccca
gctagaataattcccattgcagcattgaatccttatcaaggaaagtggacgatcaaagct
cgggtgacagctaaggcagacatcaggcactacaacaatgcaaggggtgaaggaaaagtg
ttttcttttgatctccttgactccgacggtggagaaattcgtgtaacttgtttcaacgcg
gtagccgaccagttctatgatcagatagaggtaggacgtatttacttgatctccaaaggt
accttgagaccaattcaaaagagtttcaaccatctcaataatgaatatgaaatcatgttg
gagtccgcttcaacaatccagccttgcttagatgaggacatgtccatcccaaggcagcaa
ttcaactttagagccattggagaaattgagtccatggaaaataatagtatggttgatgtg
attggtatagtcacttcanttaatcctgctggtacaataatgagaaagaatggtactgaa
actcacaagagaacccttcagttgaaggacataaagagtgttgaaataactctgtggggg
aatttttgcaacacagaagggcagaagattcaagctatgtgcgactctggcgtatttcct
gtattggctataaaagcaggccgagtcagcgattttagcggaaagtcaatcggaaccatt
tcctctagccagcttcttatagatcctgatatccccgaggcattccagttaaagcaatgg
tatgataatgagggaaagaatcataccgctctttctatatccagggaagctgcagtaact
ggaaggatggatgtgcgaaagacagtttcacagattaaggatgaaggtcttggaagatct
gagaagcctgactggataactgtgaaggccacagtatcattcatcaaggttgataatttc
tgctatacagcatgccctttggtcgtgagtgatagacagtgcnagcaaaaggtcaataac
tatagtgatgggacatggcattgtgatcgatgtgatcagagttttccggaatgtgactat
agatacctactccagtttcagattcaggaccacactggtattacgtgggtcactgctttc
caagaatgcggtgaacaaattcttggtatatctgcaaaggaactgtactttcttaagtat
gaacaccaggatgagctgaagtttgctgaggttgtgaggagggttctcttcagtcaatat
ttattcaaattgaaggtaaaagaggaaacattcagtgatgaacaacgtgtgaagtcgacc
tccattaaagcagatagagtgaatcctgcatcagaaagcaggtttcttttgggtataatt
gagagactttctggtgaagacgcccccccatccatgtatggatcctatgcttgtggagct
ggaatgcctgcttctgaatattctcatgctgaacttaatcacggcagactatctatgact
gattttgatcgttataaaatggagacttccagccaatatatgaatcaatatggtggaatt
tcaggtaatactatgagtagagaagtcccatctttctgtaataactgtggtttatccggc
cacaatttccagaactgtcccaggagcttgaacagggaagcacagtccgtcggtggcggg
ggcttcccaaactggtcttccacctctgcaatggatggtggaaattcttcaaatgtgtgt
tttaaatgcaaacaaactggccactgggctagagattgtcctggacagggcaccatatct
tcaggttttgggggcagaaacatatcttcttcatctgttggagggcctcattcacaagca
atctatggcaaacaatacgttggaggcttctaa
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