KEGG   Phalaenopsis equestris: 110028602
Entry
110028602         CDS       T05601                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
peq  Phalaenopsis equestris
Pathway
peq03030  DNA replication
peq03410  Base excision repair
peq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110028602
   03410 Base excision repair
    110028602
   03420 Nucleotide excision repair
    110028602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:peq03032]
    110028602
   03400 DNA repair and recombination proteins [BR:peq03400]
    110028602
Enzymes [BR:peq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110028602
DNA replication proteins [BR:peq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    110028602
DNA repair and recombination proteins [BR:peq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      110028602
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2 DUF3422
Other DBs
NCBI-GeneID: 110028602
NCBI-ProteinID: XP_020586175
LinkDB
Position
Unknown
AA seq 2208 aa
MNGGGRRRERLNSRRNPSKQKVRLSAEELLERKLGFDLFTEGEKRLGWLLTLAPSSWEEQ
ETYKIYSCVDLYFVCQDGSTFKAKYMFRPYFYAATKEKTQLEVDAYLRRRYEGQIANIEI
VEKEDLDLKNHLSGLSRSYLKVSFDTVQQLTHVRNDLLHVVERNQTRLGAAEAYESIYGV
RSKERPQEFVDCITDLREYDVPYHIRFAIDNDVRCGQWYDVSVSSSGLIMEKRTDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDQIMMVSYMIDAKGYLIINREFVGADVEDLEYTPKPE
FEGCFNVKNVENEVELLKLWFAHMQEVKPGIYVTYNGDFFDWPFLEKRAAHYGIKMCEEI
GFKHDIVQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVR
FARDKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEALLM
VQAYRANVICPNKHQEDHEKFHNNRLLESETYIGGHVECLECGVFRADLPTKFQLDSASY
EQLITNLDRDLQYAIRVEGKVDVDSIANYDDVKSSIIEKLKFLRDHPVREECPLIYHLDV
AAMYPNIILTNRLQPPSIVSDVICTACDFNRPGKNCLRKLEWVWRGETFMAKKSDYYHMK
KQIESELVDSNDSHAIKPFIELPKAEQQSKLKERLKKYCLKAYKRVLDKPVMEVRETGIC
MRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLADAKASGNSVKIQEALDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCA
LPGSFPENFTFKTKDEKRKFTISYPCVMLNVDVAINNTNDQYQTLTDPITKTYTTHSECS
IEFEVDGPYKAMIIPASKEEGILIKKRYAVFNHDGSLAELKGFEIKRRGELKLIKVFQAE
VFDKFLQGSTLEECYEAVAAVANRWLDLLDNQGIDIADSELLDYISESSTMSKSLAEYGE
QKSCAVTTARRLADFLGDTMVKDKGLHCQYIVACEPHGTPVSERAIPVAIIGAEPEIGRF
YLRKWCKISSGFDIRSVVDWTYYKQRLSSAIQKIITICXXXXTLPAAMQKVSNPVPRVLH
PEWLHKKVREKDDRFRQRKLVDIFSTTTKFIDEQRPRDLEDIVNIGNSIRSGPQPVVRDS
GFNKEGHSVKQSSQVNGLNMLQGPLIKLNHEDSSGESIDKNVDYQGWLAIKKRKWKLTLE
KRKRRRLGGMNESHQSADATKLPVSSLSYKHTREKNGLNSFFKKHELALLKMHWQVIQLV
SCTKPGRFLAWIVVDGVMLKINLDIPRTFYLNSKAPVTEEFPGRRVNKILPHRRPTFNLI
EVVIEEDQFRAESKKLASHLADPEVEGIYETKMPLEFHAVLQIGCVCRVDKVAKARNAQD
CWNLAELHMKTTTECSYLEETISFFYLYHSLSDGRAIYVVYFRLSGTISVVIVNPFQNRE
LSSSLLEKQFREACQALSMESPMQASYASVKVDYVRTLEAGEKLLQRVLVEYRLLHPGPT
VAVIECPNFYVIKSAVHALDDFPCICTPCNTQDSNYQALGWQVTAAKIGMHRCAASSRWF
TERILLSRYAHVPIGNFETDWLLFTADVFFSRALRDQQQVLWVSDDGIPDLGGIYEGDTC
FADEVNQPVLTYPGAYRKVAVELKIHHLAVNALLKSSLVDEMEGGSLFGYEHDANYGLSS
NEDNDNDEASSCASAFRVLKQLIQRCISDAVASGNEYADAILQHLYRWLCSPMSKLHDPA
LHRVLHKIMKKVFALLLAEFQKLGATIIFADFSKIIIDTGKVDMLAANAYCDCLIKTLQT
RDLFEWIELEPLHFWHSLLFMDQHNFGGIQAKSSIDSLAENVDCDSQVDIISSWSIADYL
PKVTQDHFILIVSEFLYLPWKYLKAQIASSNIKRDATSTQSITVSTAETLESCVNEYLKE
QISCYFSEKLLKIVCDTLHHFKAKNNVVDNTENHDFKHFDTSHSNKGNAALEFIKHVCAV
LTLDENVQHDILRLRKNLLKLVRVKEFAPEAQFHDPCLSFTLPNVICSYCNDCRDLDLCR
DPTLLERDWHCAAPHCGRPYDLEQMENSLLQIVRQRERLYHLQDLVCLKCRQIKAVHLAE
QCSCGGSFRCVEDSSEFLSKMKVIMSIASRQKLQLLKDCISWILEVKH
NT seq 6627 nt   +upstreamnt  +downstreamnt
atgaatggaggtggcaggcgtcgggaaagattaaactctcgaagaaatccatcgaagcag
aaggtccggctgtctgcagaagagcttcttgaaaggaagctagggtttgatctcttcacc
gaaggagagaagaggctcggatggctgctcaccctcgctccatcttcatgggaggaacag
gaaacatataagatatatagctgcgtcgatctatactttgtctgccaggatggatccaca
ttcaaggctaagtacatgtttcggccttatttctatgcggcaaccaaggaaaaaactcaa
ctagaggtggatgcatatctccgtcgccgctatgaaggccaaattgccaatattgaaatt
gtggaaaaagaagatctagatttgaaaaatcatctctcaggcttgtccagatcatacttg
aaggtaagctttgatactgtccaacaactgacacatgttaggaatgatctcttacatgtt
gttgaaaggaaccaaacaagattgggtgctgcggaagcatatgaatccatatacggtgtc
agaagcaaggagaggccacaagaatttgtcgactgtatcacagatcttcgtgaatatgat
gttccttaccatattcgttttgcaattgataatgatgttagatgtggacaatggtatgat
gtaagcgtatctagcagtggtctgataatggaaaaaagaactgatcttcttcaacgtgct
gaagttcatgtttgtgcttttgatatcgaaactacaaaacttcctctgaagtttccagat
gcagaatatgatcagataatgatggtgtcatatatgatagatgcaaaaggttacctaatc
attaatagagagtttgtgggagcagatgttgaggatttggaatatacaccaaaaccagaa
ttcgagggctgttttaatgtgaaaaatgtggaaaacgaggtagagcttctcaaactctgg
tttgcacacatgcaggaggtaaaacctggaatttatgtcacctacaatggtgatttcttt
gactggccatttttggaaaaaagggctgctcattatggaattaaaatgtgtgaggaaata
ggattcaagcatgatattgttcaaggagaatgtcgtgctaaattttcatgccatttggat
tgctttgcttgggtcaaacgtgacagctatcttcctcagggaagccatggtttaaaggct
gtcactaaagccaagttaggttatgatccattggaggtgaaccctgaagatatggttcgt
tttgctagggataaacctcagatgatggcttcctattctgtatcagatgctgtggcaact
tactatctttatatgacttatgttcatccgtttattttctcacttgcaactataattccc
atgcctccggatgaggttcttcggaaaggaagtgggaccctatgtgaagcacttcttatg
gtgcaggcatacagggccaatgtgatatgtcccaacaagcatcaagaggatcatgagaaa
tttcacaacaacagacttctagaaagtgaaacatatattggaggccatgttgaatgcctt
gaatgtggtgtttttagagcagatcttcctacaaaatttcagcttgattcagcttcatat
gagcaactaatcactaatcttgaccgtgatctccaatatgcaatcagagttgagggaaag
gttgatgttgactctattgcaaactacgatgatgtaaaaagttctataattgagaagctt
aagttcttgcgagatcatccggtgcgagaggaatgccccttgatttatcatttagatgtt
gctgcaatgtatccaaacatcattttgacaaatagactccagccaccgtcgatagtttca
gatgtgatatgcacagcatgtgatttcaatcgtccgggaaagaattgtctccggaagctt
gaatgggtttggcgtggggaaacttttatggcgaaaaaaagtgattattatcatatgaaa
aaacaaattgagtcggaactcgtagattcaaatgatagccatgccataaagccctttata
gaactcccaaaggcagaacagcagtcgaagctgaaagaacgcttgaagaagtactgccta
aaggcttataaacgggttcttgacaaacctgtgatggaggttcgagaaactggaatttgc
atgcgtgaaaatcccttctatgttgatacagtgcgaagttttcgagatagaagatatgaa
tataagggcctgaataaagtttggaagggcaagctggcagatgcaaaagccagtggcaat
tcagtgaagattcaggaggcactggacatggttgttctctatgattctttacagcttgct
cataaatgcatcctcaattcattttatggatatgtcatgcgcaagggtgcaagatggtac
tcaatggaaatggctggtgttgtcacctatactggagcaaagatcattcagaatgcccgt
ttacttgtcgaaaagattggaaggcctcttgaactggatacagatggtatctggtgtgct
cttccagggtcttttccggagaatttcacatttaaaacaaaagatgagaagagaaagttc
accatctcatacccatgcgtcatgcttaatgttgatgttgcaataaacaacaccaatgat
caatatcagacacttacggaccctattactaagacatataccacacacagtgaatgctcc
attgagtttgaagtggatggtccttacaaagcaatgatcattccggcttcaaaagaagaa
ggaatcttaattaagaagagatatgcagtttttaatcatgatggaagcttagcagaactg
aaaggctttgaaatcaagcgaagaggtgagctgaagctcataaaggttttccaggctgaa
gtttttgacaagttcctgcaaggttcaacattagaagaatgctatgaagctgttgcagca
gtcgctaatcgatggctagaccttttagataatcaggggatagacattgctgacagtgag
ctgcttgattatatatcagaatcaagcacaatgagcaaatctttagctgaatatggcgaa
cagaaatcatgtgctgtgactactgctagacgccttgctgattttcttggtgatacaatg
gtcaaagacaagggcctacattgtcaatacatcgttgcctgtgaaccacatggtactcca
gtaagtgaacgtgctattcctgttgcaataattggagctgagccggaaattggaagattt
tatctgcgtaaatggtgcaaaatttcatctggttttgacattcgatcagttgtcgactgg
acttattataagcaacgcctttcttcagctatacaaaagattattacaatttgctnnnnn
nnnnntacacttcctgctgcaatgcagaaggtctctaatcctgttcctagagtgctgcat
cctgaatggttgcacaaaaaagtacgcgagaaggatgatcggtttcgccagcgtaaacta
gttgatatcttcagtacaacaacgaaatttattgatgaacaaaggcccagagacttagaa
gacatcgtaaacattgggaacagtattagaagtggtcctcagcccgtggttcgggactct
gggtttaacaaagaaggtcattcagtaaagcaatcttctcaggtaaatgggttgaacatg
ctacaagggcctttaataaaactgaatcatgaggattcttctggagagagcattgataaa
aatgttgattatcaaggatggcttgcgattaagaaaaggaaatggaaattaactcttgag
aaacgaaagaggagaagattaggtggaatgaatgaatcacatcagtctgctgacgctact
aaattgcccgtctcttctctaagctacaagcatactagagaaaagaatggattgaattca
ttctttaaaaagcatgaattagcccttctcaaaatgcactggcaggtaatacaacttgtc
tcgtgtacaaaacctggacgattcctggcctggatagtcgtggatggtgtcatgcttaag
attaacctagacattcctcgaactttttatcttaattctaaagcacctgtgactgaggag
tttcctggaaggcgtgtgaataaaattcttcctcataggagacctacctttaatctcatc
gaggttgtaattgaggaggaccaatttcgggctgaaagcaaaaaacttgctagtcacttg
gcagatcccgaagttgaaggaatatatgagacaaagatgcccttagaatttcatgcagtc
cttcagattggttgtgtctgccgcgtggacaaagttgccaaggctcgaaatgcacaagat
tgctggaatctcgctgagttacatatgaagactacgactgaatgttcctatttggaagag
actatttccttcttttatttgtatcatagtttatctgatggaagggcgatttatgttgta
tattttcggctttctggaaccatctctgtagtgattgtcaacccatttcaaaacagagag
ctttcctcctctcttctcgaaaaacaattccgagaagcttgccaagcactgtccatggaa
tctcccatgcaagcatcctatgcatccgtgaaggtggattatgtgcgtacacttgaagct
ggagaaaagctactgcaaagagttctagttgaatacagacttcttcatcctggacctacc
gttgctgtcatagaatgccctaatttctatgtgatcaagtcagcggtacatgcactagat
gattttccttgcatttgtactccttgtaacactcaggacagcaactatcaggctcttgga
tggcaagtgacggctgcaaaaattggcatgcaccggtgcgctgcatcctcccggtggttt
actgaaagaatcttactatccagatatgcacatgtgccaataggaaattttgaaactgat
tggctcttatttactgctgacgtctttttttctagagcattgcgagatcaacagcaggta
ctttgggtatcggatgatggcatcccagatttaggaggcatatatgagggagatacatgc
tttgctgatgaagtcaatcaaccggttctcacttatcctggagcatatagaaaggtggct
gttgaattaaagattcatcacctagctgtaaatgctttacttaaaagtagcctggtcgat
gaaatggaaggtggatcattgttcggatatgaacatgatgcaaattacggattatcttct
aatgaggataatgataatgatgaagctagttcttgtgcgtctgcatttcgagtgcttaag
caattaattcaaagatgtatttctgatgctgtagcgtctggaaatgaatatgctgatgca
attttgcagcatctttaccgatggctttgtagccccatgtcaaaactacatgaccctgca
cttcatcgagttctacacaagatcatgaagaaagtatttgctctgcttttggccgagttt
caaaagttaggagctactatcatattcgctgatttctctaaaatcattatagacactgga
aaggttgatatgttggcagcaaatgcttattgtgactgtctgatcaaaaccctgcaaaca
agggatctcttcgagtggattgagcttgaaccacttcacttctggcattcattattattt
atggatcagcataattttggagggatccaggcaaaatcctccattgattctttggctgaa
aatgtggattgtgattctcaagtagatattatttctagttggagcatagcagactatttg
ccaaaagtgactcaggaccattttattttgattgtttctgaattcttatatctcccatgg
aaatatttaaaagcgcaaatagcaagttctaacatcaaaagggatgccacttctactcaa
tccattactgtttcaactgctgaaacacttgaatcctgtgttaacgaatatctgaaagag
cagattagctgctatttctcagaaaaactgttaaagattgtttgtgatacgcttcaccac
ttcaaagcaaagaacaatgttgttgataatacggaaaatcatgatttcaaacattttgat
acttctcattcaaacaaaggaaatgctgcattggaatttattaaacacgtctgtgctgtt
ctcacacttgatgagaatgttcagcatgatatcttgagattgaggaagaaccttttgaaa
ttagttcgtgtgaaagagtttgccccagaagcacagttccatgacccatgcctatctttc
actctgccaaatgtaatttgcagctattgtaatgactgtagggaccttgacttgtgccgt
gatccgactctcctagaacgagattggcattgtgccgcaccacactgcggtcgaccgtac
gatctcgaacaaatggaaaattccctccttcagattgttcggcagagagaaagactttac
catttgcaggatctggtctgcctgaaatgcaggcaaattaaggccgtgcatttagccgag
caatgttcgtgcggtggctcgttcaggtgcgtggaagattcgtctgaattcctaagcaaa
atgaaagtgatcatgagcatcgcgagccgccagaaactccagctgctcaaggattgcatc
tcatggatattggaagtcaagcattaa

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