Phalaenopsis equestris: 110028920
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Entry
110028920 CDS
T05601
Name
(RefSeq) exosome complex component RRP41-like isoform X1
KO
K12587
exosome complex component MTR3
Organism
peq
Phalaenopsis equestris
Pathway
peq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110028920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110028920
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110028920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Med17_C
Motif
Other DBs
NCBI-GeneID:
110028920
NCBI-ProteinID:
XP_020586638
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MRNDKSLLRTNEKDIKAERAPEISEMATGTSGTYSPSQCLERKQQEQKRKTFQEVDWARS
DGRNFHQCRPAFLRTGAASVASGSAYAEFGSTKVIVSVFGPRESKKAMMYSDVGRLNCHV
SYTTFSTPIRGQGSDNKEYSSLLHKALEGAIRLKTFPKTTVDIFALVLESGGGDLPVIIS
CASLAIADAGIMMYDLVSAVSLSCIGKKLVIDPTSEEEAWQDGSLMITYMPSRNEVTQFT
LTGEWSTPKINEAMELCLDACSKLADILRLCLKENALELAP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgacaaatcacttctcaggacaaacgagaaggacattaaggcggaaagagct
ccagaaatctccgagatggctactggaacatctgggacctattcaccatcgcaatgcttg
gaaaggaaacaacaagaacagaaaaggaaaacttttcaagaagttgattgggctcgatcc
gatggtcggaatttccatcagtgcagacccgcctttctcagaacaggtgcagcaagtgtt
gcatcagggtcagcatatgctgagtttggctcgaccaaggtcattgtatcagtatttggt
ccgagggaaagcaagaaggcaatgatgtatagtgatgttggtcgtttaaattgtcatgtg
agctatacaacattttccactcctatacgtggccagggctctgacaataaggaatattca
tcattacttcacaaagcattagaaggtgctatcagactgaaaactttcccaaagaccacc
gtcgatatttttgcactggtactggaatctggtggtggtgatcttcctgtcattataagt
tgcgcaagccttgctattgctgatgctggaatcatgatgtatgaccttgtgtctgctgtt
tcactgagttgtatcggaaagaaattggtaattgatcccacctcagaggaggaagcttgg
caagacggaagcctcatgatcacatatatgccatcccgtaacgaggtcacccagtttaca
ctcactggagaatggtccactcccaaaatcaacgaggctatggaactatgccttgatgct
tgctcaaagcttgcggatattctgaggttatgcctcaaggagaatgctttagagttggca
ccttga
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