Phalaenopsis equestris: 110029071
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Entry
110029071 CDS
T05601
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
peq
Phalaenopsis equestris
Pathway
peq03022
Basal transcription factors
peq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110029071
09124 Replication and repair
03420 Nucleotide excision repair
110029071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peq03021
]
110029071
03400 DNA repair and recombination proteins [BR:
peq03400
]
110029071
Transcription machinery [BR:
peq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110029071
DNA repair and recombination proteins [BR:
peq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110029071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
110029071
NCBI-ProteinID:
XP_020586848
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MDAINKAVKYRISLKEPGIPGVLRMSEERFTFIPHDPRSAFKLDVSFKSIKVHKFSKVGS
KQALLNLLHEGGGYIFEFDNFSDRNICRDFVGKVLGKLQATVSSKDDKAIPDKTTHSVLG
EQLSPMEMEHRIKLLRDDSELQRLHKQFVMTGILTESEFWATRKSLLNDAAIKVSKQRTG
FKSSMLADIRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHRAFLDLVPSKMSEKDFWTKY
CRAEYLHRTNNSVAAAAEAAEDEELAVFLKHDDILADEIRKKIRRVDPTLDMEADHADDY
VHLPNHGILRDGIKETIDAENELSRRTLSQDLNRHAAVVLEGRALDVELGDTRTVAEALA
RSKKESSVEALNRNENQERFEKACRMTEIEDLQGPHRLPYAPLFIKDPRDYFDSQHANAL
RALGDSTAGFINADYNLSLEESYEYLLKQISEAKVTGLKDIVQSDVALKVFNGLNQHLSS
IKHHIGKGSLESVLDQLPRRTKDELMIHWTSIQELLRHFWSSYPITTGYLYNKVLRLKEA
MTQIYHKLQEIKESVQSDYRHLVSLLVQPMLQALDAAFAHYDNEQQKRTAKGGAMPNGFT
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgatcaacaaagctgttaagtataggatatcgctaaaggagcctgggattcct
ggagttctacggatgtctgaagagcgatttactttcattcctcatgatcctagatcagcg
ttcaagcttgatgtttcctttaaaagcattaaagttcacaagttcagcaaagttggctcc
aagcaagctttgttgaatcttctgcatgagggcggaggctatatttttgagtttgataat
ttctctgacagaaatatttgcagagattttgtaggaaaagtacttggaaaacttcaggct
acagtttcttctaaagatgataaagcaatccctgacaagacaactcattcagttcttggt
gaacaactaagccctatggagatggaacatcgaatcaagctgttgcgggatgatagtgaa
ttacagaggctgcacaaacaatttgttatgactggtatattgacagaatctgagttttgg
gctactaggaagagtttacttaatgatgctgcaattaaggtgtccaaacaaaggactggg
ttcaaaagttccatgcttgctgacatcaggccatcaactgatggtcggacaaataaagtc
acgtttagcttgacaccggagataattcatcagatttttgctgaaaaacctgctgttcat
cgtgcttttcttgatcttgtacccagtaagatgtctgaaaaggatttctggacaaagtat
tgtagagctgaatatcttcacaggaccaataattcagtggctgcagccgcagaggcagct
gaagatgaagagcttgctgtatttttaaagcatgatgatatcttagctgatgaaattcga
aagaagattagacgtgttgatccaacattggacatggaagctgatcacgcagatgactac
gtacatcttcctaatcacggtattttgcgtgatggaataaaggaaaccattgatgctgag
aatgaattatcaagaagaactctctcacaagatcttaataggcatgcagctgttgtcctt
gagggaagggctttagacgttgagttgggggatacaaggacagttgctgaagctcttgca
aggtcaaagaaggagtcctctgttgaagcactgaatagaaatgaaaaccaagaacgtttt
gagaaggcttgtcgaatgactgagattgaggatcttcaaggtcctcataggctcccatat
gcaccactgtttattaaggatcctcgtgactactttgactctcaacatgccaatgcactt
agagctttaggtgatagcaccgctggatttataaatgctgactacaatcttagtttggag
gagtcatatgaatatttactgaaacaaatctctgaagcaaaagtgacagggttgaaggat
attgtccaatctgatgttgctttgaaggtctttaatggattgaatcaacatctttcaagt
atcaagcatcacattggaaagggctccctcgagagcgtccttgaccagcttcctagaagg
acaaaagatgagctcatgattcattggacttctattcaggaactactgcgccatttctgg
tcatcatatcctattacaaccggatacctgtataataaggttttaagattgaaggaagct
atgacacaaatatatcacaagctgcaggaaattaaggaatcggtgcagtcagattatcga
catctcgtatctctccttgttcagcctatgctgcaggctctagatgctgcctttgcccat
tatgataatgagcagcagaaacgaaccgctaaaggtggagcaatgccaaatggttttacc
ctgtaa
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