Phalaenopsis equestris: 110029586
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Entry
110029586 CDS
T05601
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
peq
Phalaenopsis equestris
Pathway
peq03022
Basal transcription factors
peq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110029586
09124 Replication and repair
03420 Nucleotide excision repair
110029586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peq03021
]
110029586
03400 DNA repair and recombination proteins [BR:
peq03400
]
110029586
Transcription machinery [BR:
peq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110029586
DNA repair and recombination proteins [BR:
peq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110029586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
Tfb4
Motif
Other DBs
NCBI-GeneID:
110029586
NCBI-ProteinID:
XP_020587598
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MTYDGGGGRKRDERMENDVEEDEEEEETGGRGLQAWERVYADERSWEDLQEDESGLLRPI
DTKTIAHAQYRRRLLQRSTHGASRIQKGLIRYLYVVIDLSRAASETDYRPSRMAVVAKCA
GTFIREFFDQNPLSHIGLVTIKDGVSQCLTELGGSPDSQIKALMGKLECSGDASLQNALD
LVHGYLSQVPSYGHREVLILYSSLNTCDPGDIMETIKQCKKAKIRCSVVGLSAEIYICKH
LSEETGGLYTVALDESHLKELLLEYAPPPPAIAEYAIANLIKMGFPQRGAEGAISICSCH
KEAKVGGGYTCPRCKARVCELPLECRICGLTLVSSPHLARSYHHLFPVTPFNEVSHTLPI
RLQQKLPQTCFGCQQSIISHGSKSNPHVSCPKCNQHFCLDCDIYIHESLHNCPGCESQRQ
QST
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacctatgacggcggcggtggccgcaaaagagatgagcgaatggaaaatgatgtggag
gaggatgaggaagaagaggagactggaggacggggcctccaggcgtgggagagagtatac
gccgatgagaggtcgtgggaagacctacaggaggacgagtcagggcttctccgccccatt
gacacgaagaccatcgctcacgcccaataccgccgcaggcttctccagagatcaacccac
ggggcctccagaatccagaagggtctcatccgatacctctacgtcgtaattgatctctcc
cgggcagcttcggaaacagattatcgcccaagccggatggctgtggttgcaaaatgtgct
gggacattcattagggagttcttcgatcaaaatccactaagtcatattgggcttgtaacc
ataaaagatggtgtttcccagtgtttaacagagcttggaggcagtccagattcacagatc
aaggctcttatgggaaagcttgaatgctcaggagatgcttccttacagaatgctcttgat
cttgtccatggatatctttcacaagttccttcatatggccaccgagaagttttgattctc
tattcttccctcaacacctgtgatccgggtgatataatggaaacaattaaacaatgtaag
aaagctaaaataaggtgctctgttgtaggactttcagctgagatttacatatgcaagcat
ctgtctgaggagacagggggtttgtatactgttgcccttgatgagtcacacttaaaggag
ttgttactggagtatgcgccgccacctccagctatagcagagtatgctattgccaacctg
attaaaatgggttttccgcaaagaggagccgagggggctatttctatatgttcctgtcac
aaggaagcaaaagtaggtggtggctatacctgtccaagatgtaaagcacgagtttgtgaa
ctcccattggaatgtcggatatgtgggctgacgcttgtttcttctccacatttagcaaga
tcttatcatcacctatttccagtgacgccatttaatgaagtgtcacatacccttcctatt
agattgcagcagaagttgccacagacttgttttggatgccagcaaagtattataagccat
ggaagcaaatccaatccccatgtctcatgcccaaagtgcaaccaacatttctgccttgac
tgtgatatctacatccacgagagcttgcataattgccccggttgtgagagccaacgtcaa
caatcaacatga
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