KEGG   Phalaenopsis equestris: 110029666
Entry
110029666         CDS       T05601                                 
Name
(RefSeq) THO complex subunit 6 isoform X1
  KO
K13175  THO complex subunit 6
Organism
peq  Phalaenopsis equestris
Pathway
peq03013  Nucleocytoplasmic transport
peq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110029666
  09122 Translation
   03013 Nucleocytoplasmic transport
    110029666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:peq03019]
    110029666
   03041 Spliceosome [BR:peq03041]
    110029666
Messenger RNA biogenesis [BR:peq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110029666
Spliceosome [BR:peq03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110029666
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_WDR41 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_ACSF4 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_IP5PC_F Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_Nup120_160 NBCH_WD40 v110
Other DBs
NCBI-GeneID: 110029666
NCBI-ProteinID: XP_020587725
LinkDB
Position
Unknown
AA seq 389 aa
MEVGRNTGGRGGGDARQWDEESYRRSILIERELSSRIVFRTAFAPSVNPNPEIVLVAASD
GSLSAYSIASCIASCPRPMLCSKETDQKVAPVVLSAGPLCSIQAHKGPTYDLKLDGNDED
ALLLSCGDDGYIRVWKWAEVHMAAVQGSHKGEKLRPILELVNPQKERPWGALSPIPENNA
IAVDKEDGSIFSAAGDSCAYCWDMETGKKKIVFKGHSDYLHSVTVRKSNNQIITGSEDGT
ARVWDCRSGRCAHVIDPQKSFKLKESTWISSVALDNSGSWLVCGTGRGLSAWNLISYECI
FSFDSHSPIQDLLFHDNQILAVGSEPVLRCFNINGKILSQVHCAPFSAFSISVHPSGVKA
VAGYGGLVDIISEFGSHLCIFCCKSADSL
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggaggtcggaagaaacactggcggacggggtggaggagatgcgaggcagtgggacgaa
gaaagctaccggcgtagcattcttatcgagagggagcttagctctcgcattgtcttcagg
accgcttttgctccctccgtaaaccctaatcctgaaatcgtactcgtggcagctagcgat
ggatctctgtcagcctattcaatcgcgtcctgcatcgcttcctgtccacggcctatgctt
tgtagcaaggagaccgatcaaaaggttgcacctgtagttttgtcggctggtccactttgc
tccattcaggcacacaaaggcccaacatatgacttgaagttagatggaaatgacgaggac
gctctactcctgagttgtggtgatgatggctacattagggtttggaagtgggcagaagtt
catatggctgcagttcaggggtcacataaaggtgaaaagttgcggccaatactggagtta
gtgaaccctcaaaaggaacgtccatggggtgcgctttccccaattccagaaaacaatgcc
atcgctgtggacaaagaggatggatctattttctcagctgctggcgattcctgtgcttat
tgttgggatatggagacaggcaaaaagaaaattgtattcaaggggcactcagattacctg
cactctgttactgtgcgtaaatccaacaatcagattattactggttctgaagatggcact
gcgagggtatgggactgcagaagtggaagatgtgctcatgttatagatcctcagaagagc
ttcaagttgaaggaatctacctggatcagttcagtggcacttgataatagtggaagttgg
cttgtctgtggaactggtagaggtttatcagcttggaacctaatctcatatgagtgtatt
ttcagcttcgatagccattccccaatccaagatctattgtttcatgataatcaaattctg
gcagttggttctgaacctgtgctaagatgtttcaatattaacgggaaaattctttctcaa
gtccattgcgctcctttttcagcgttttctatttctgtgcatccttcaggagtcaaagca
gttgctggttatggtggactggtggatattatctcagaatttggcagccatctttgcata
ttctgctgtaaaagcgcagactctctttaa

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