Phalaenopsis equestris: 110029897
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Entry
110029897 CDS
T05601
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03030
DNA replication
peq03410
Base excision repair
peq03420
Nucleotide excision repair
peq03430
Mismatch repair
peq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110029897
03410 Base excision repair
110029897
03420 Nucleotide excision repair
110029897
03430 Mismatch repair
110029897
03440 Homologous recombination
110029897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peq03032
]
110029897
03400 DNA repair and recombination proteins [BR:
peq03400
]
110029897
Enzymes [BR:
peq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110029897
DNA replication proteins [BR:
peq03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
110029897
DNA repair and recombination proteins [BR:
peq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
110029897
MMR (mismatch excision repair)
DNA polymerase delta complex
110029897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
110029897
NCBI-ProteinID:
XP_020588039
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MNAGSGKRRGLAAEASPNPSKRFQSGPPGPGNGKPNPSPAVNGINEMEDDLMDEDVFLEE
TLLKYDEDEEALRLLQDEAVAARFSKWKRPALSTSFIFFDAVFQQLEIDYVIGETHKELL
PMSSGPAAILRIFGVTKEGHSVCCHVHGFEPYFYVSCPSGMSPDDISGFQKTLEGRMRES
NRSSNVPRFIKRIEMVQKKSIMYYQQHEAQPFLKIIVTLPTMVASCRGILERGIQIEGLG
SKNFLTYESNVLFTLRFMIDCNIGGGNWIEVSAGKYKKTKAGFSYCQLELDCLYSELISH
VPEGEYSKMAPFRILSFDIECAGRKGLFPEPTHDPVIQIANLVTIQGEGQPFIRNVMTLK
SCSPIVGVDVMSFDKEKYILLAWRDFIREIDPDILIGYNICKFDLPYLIERAEALKIAGF
PILGRVRNSRVRIRDTTFSSRQYGIRESKDITVEGRVQFDLLQAMQRDYKLSSYSLNSVS
AHFLGEQKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARV
TGVPISFLLARGQSIKVLSQLLRKAKQKNLVIPNIKGQGSGQETFEGATVLEAKTGFYEK
PIATLDFASLYPSIMMAYNLCYCTLLTPENARQMNLPAESINKTPSGDTFVKSELQKGIL
PEILEELLTARKRAKADLKEAKDPFEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEI
SSSVTSYGRQMIEHTKKLVEERFTTLADYEYNAEVIYGDTDSVMVQFGVPTVEAAMKLGR
EAAEYISGTFIKPIKLEFEKVYYPYLLISKKRYAGLYWSNPDTYDKMDTKGIETVRRDNC
LLVKNLVTECLHKILIDRDVSGAVQYVKNTVSDLLMGRVDLSLLVITKGLTKTGDDYAVK
AAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDSQYY
LENQLQKPLLRIFEPMLKNAQQELFKGKHTRNLKNSTPSNSGIMKFAKKQLSCLGCKALI
SDSDRTLCGHCKSREAELYCKTVANVAEMEALFGRLWTQCQECQGSLHQDVLCTSRDCPI
FYRRKKAQKDMAEAMMQLDRWDF
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccggcagtggaaagcggcgtggcttggcagccgaggcttctccaaacccttcg
aagagattccagtccggacccccagggcctggaaatggcaaacctaatccttccccggcg
gtgaacgggatcaacgagatggaagacgacctaatggacgaagacgttttcctggaagaa
accctcctcaagtacgatgaggacgaagaggccctccgcttacttcaagatgaggctgtt
gccgctcggttttcgaaatggaaacgccctgctctttccacttcgttcatcttctttgat
gcagtatttcagcagttagaaattgattatgtgattggagagacccacaaggagctgctt
ccaatgtcttccggccctgcagcaattctcagaatttttggagtaaccaaggaaggtcat
agtgtgtgttgccatgtacatggatttgagccatatttctacgtaagttgtccctcggga
atgagccctgatgacatctcaggatttcagaaaactctcgagggtagaatgagagaatcc
aacagaagcagcaatgtgccacggtttatcaaacggattgagatggttcaaaagaagagc
atcatgtactaccagcaacatgaagctcaaccttttctaaagatcatagttactctgcca
accatggttgctagttgtcgtggcattttggagaggggcatacagattgagggccttggt
tcaaagaacttccttacatatgaaagcaatgttcttttcacgctgcgcttcatgattgat
tgcaatattggcggaggaaactggatagaagtttctgcagggaagtataagaaaacaaag
gcaggtttttcttattgccaattggagttggattgcctatattcagaattaattagccat
gttccggaaggagaatactcgaaaatggctccatttcgcatattaagttttgatattgag
tgtgctggtcgtaaaggactcttccctgagcctactcatgatcccgttattcagattgcc
aacttggtcactatccaaggtgaaggccagccttttatacgaaatgtcatgactttgaag
tcctgttcacctattgttggggttgatgtgatgtcctttgacaaagaaaaatatatttta
cttgcgtggagggacttcattcgtgagatagatccagatattttaattggatacaacatc
tgtaaatttgatctgccttatttgatcgagagagccgaagcactcaagatagcaggattt
ccaattcttggccgtgtgagaaatagtcgggttcggattcgggatactactttctcttca
agacagtatggcattcgagaaagcaaagacataactgttgaaggaagagttcaatttgat
cttcttcaggcaatgcaaagggattataaacttagttcttactctttgaattctgtttct
gcacacttccttggcgagcaaaaagaggacgtccaccattcaataatatctgaccttcag
aatgggaactcggagacaagaaggcggcttgctgtatattgcctgaaggatgcttacctt
ccacaacggcttttagacaaattaatgtatatttacaactatgtggagatggcacgagtt
actggagttcctatttccttccttctagccagagggcagagcattaaggttctttcacaa
ctactgaggaaagccaaacagaagaatcttgttattccaaatatcaaagggcaggggtca
gggcaagaaacttttgagggagcaactgttttggaggcaaaaactgggttttatgaaaag
ccaatcgctactctagattttgcttccttgtatccatccatcatgatggcctacaatcta
tgctactgcactttgttgacgccggaaaatgcccgacagatgaacttaccagcagaaagt
attaacaagactccatccggtgatacttttgttaaatctgaactgcaaaagggcatcctt
ccagaaattcttgaagaattgttgactgctcgtaaaagagcaaaagcagacttaaaagaa
gcaaaagacccatttgagaaggctgtactggatggccgccagctagcattgaagattagt
gcgaattctgtttatggttttactggtgctaccgttgggcagttaccctgtttagagata
tcttccagtgtgacaagctatggtcgacaaatgattgagcacacaaagaagctcgtggaa
gaaagatttacgacactagctgattatgaatataatgcagaggttatttatggagacaca
gattctgttatggtacaatttggcgtgcctactgtggaagctgcaatgaaattaggaaga
gaggcggcagagtacatcagtggtactttcataaagcctatcaagctagagtttgaaaag
gtatattatccatacttactgataagcaagaagaggtatgcaggattgtattggtcgaat
cctgatacatatgacaaaatggatacaaaaggcattgagactgttaggagagacaattgt
ctgctggttaaaaatctggtgacagagtgcctccacaagatattgattgacagagatgtt
tctggtgctgtacagtatgtcaagaacactgtttctgatcttttaatgggccgagtggat
ctttctcttttggtcataacaaagggtctgacaaaaactggtgatgattatgccgtgaaa
gctgctcatgttgaacttgcagaacgtatgcgaaaacgtgatgctgctacagctccaaat
gtgggagatcgggttccttatgttattattaaagctgccaaaggtgccaaggcatatgaa
aggtcagaagatcctatttatgtgctagagaataatattcccattgattctcagtattat
cttgaaaaccaacttcagaagccacttctgaggatatttgaacctatgcttaagaatgcc
cagcaagagcttttcaaaggaaaacatacaagaaacttgaagaattcaacaccttcaaac
agcggaataatgaaatttgcgaagaaacagcttagctgccttggatgcaaagctttaatc
agtgattcagatcgaacactttgtggacattgcaaaagcagggaagcggaattgtactgc
aagaccgtagcaaatgttgctgagatggaggcgctttttgggaggctttggacacaatgt
caagaatgtcaaggttcgcttcaccaggatgttttgtgtacaagtcgagattgtccgatc
ttttatcggagaaagaaagcacagaaagatatggcggaggcgatgatgcaattggatcga
tgggacttttga
DBGET
integrated database retrieval system
