KEGG   Phalaenopsis equestris: 110030012
Entry
110030012         CDS       T05601                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
peq  Phalaenopsis equestris
Pathway
peq03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110030012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:peq03019]
    110030012
Enzymes [BR:peq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     110030012
Messenger RNA biogenesis [BR:peq03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     110030012
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N nSTAND3 SRPRB AAA_22 AAA_24 ATP_bind_1 MMR_HSR1
Other DBs
NCBI-GeneID: 110030012
NCBI-ProteinID: XP_020588205
LinkDB
Position
Unknown
AA seq 427 aa
MAAPASIRQFKLAKESELRVEVGADSPFRIRLVSGTAEIFGTELPPENWLSVPPRQKFAI
FTWHGATVEVEGTSEVEYVADETPMVSYVNVHAILDGRRARAKASSSNDFVASQGPRVIV
VGPTDSGKSSLCRMLLSWACKLGWKPMFVDLDIGQGSITIPGCIASTPIEMPIDAVEGIP
LEMPIVYFYGHTTPSINGELYKVLVKELAQTLERHFSANAESRAAGMVINTLGWVEGLGY
ELLLHAIDTFNASVVLVLGQEKLYSLLKDVAKNNPNMDIVKLHKSGGVVSRNPKFRQKSR
GFRIREYFYGLFNDLSPHSNIVSFSDITVYRIGGGPQAPRSALPIGAEPVADPTRLVAVN
INRDLLHLVLAVSYAKEPEQIISSNVAGFIYVTDIDIQRKKITYLAPCPGELPSKLLIVG
TLTWLES
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggctgctccggcgtcgatccggcagttcaaactggccaaggagagcgaacttagggtt
gaggtcggcgccgattctccattccgcatccgcctcgtctccggcaccgctgagattttt
ggaaccgagcttccgccggagaactggctctccgtaccccctcgtcaaaagtttgctatt
tttacgtggcatggagctactgtggaagtagaaggaaccagcgaggtcgagtatgttgct
gatgagactcccatggtgagttatgtgaacgtacacgcgatactggatggcaggagagcg
cgggctaaggcatcgtctagtaacgatttcgttgcatcccagggtcctcgggttattgtg
gttgggcccacggattctgggaaaagtagtctgtgcaggatgcttctgagttgggcgtgt
aagctgggctggaagcctatgtttgtagatttggatattggtcagggatccattactatt
cctggatgtattgcttccactccaatcgaaatgcctattgacgctgttgaagggatacct
ctagaaatgcccattgtgtacttttatggacacacgactccaagcataaatggagaacta
tacaaggttcttgtgaaggagctagctcaaacactggagaggcatttctctgctaatgca
gagtctagggctgcaggcatggtgatcaacactttgggttgggtggaaggccttggttat
gagttgcttcttcatgcaattgacactttcaatgctagtgttgttcttgtcttagggcag
gaaaagctctatagcttgttgaaagatgtagcaaagaataatcctaatatggacattgta
aaacttcacaagtctgggggtgttgtttcaagaaacccaaaatttcggcagaaatctcgg
ggcttcaggattagggagtacttttatggcctcttcaatgatctgtctccgcattctaat
atcgtcagtttcagtgatataactgtctacagaattggtggtggtccacaggccccacgt
tcagcactaccaattggagctgagcctgtagctgaccctactcggctggttgctgttaac
ataaacagagacttacttcatttggttcttgctgtttcatatgcaaaggaaccagagcaa
ataatctctagtaatgttgctgggtttatctatgtcacggacatcgacatccagaggaag
aagatcacatatcttgctccttgcccaggtgagctcccaagcaagctgttgattgtagga
actttgacatggttggaaagctaa

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