Phalaenopsis equestris: 110030012
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Entry
110030012 CDS
T05601
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110030012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110030012
Enzymes [BR:
peq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
110030012
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
110030012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
nSTAND3
SRPRB
AAA_22
AAA_24
ATP_bind_1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
110030012
NCBI-ProteinID:
XP_020588205
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAAPASIRQFKLAKESELRVEVGADSPFRIRLVSGTAEIFGTELPPENWLSVPPRQKFAI
FTWHGATVEVEGTSEVEYVADETPMVSYVNVHAILDGRRARAKASSSNDFVASQGPRVIV
VGPTDSGKSSLCRMLLSWACKLGWKPMFVDLDIGQGSITIPGCIASTPIEMPIDAVEGIP
LEMPIVYFYGHTTPSINGELYKVLVKELAQTLERHFSANAESRAAGMVINTLGWVEGLGY
ELLLHAIDTFNASVVLVLGQEKLYSLLKDVAKNNPNMDIVKLHKSGGVVSRNPKFRQKSR
GFRIREYFYGLFNDLSPHSNIVSFSDITVYRIGGGPQAPRSALPIGAEPVADPTRLVAVN
INRDLLHLVLAVSYAKEPEQIISSNVAGFIYVTDIDIQRKKITYLAPCPGELPSKLLIVG
TLTWLES
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggcgtcgatccggcagttcaaactggccaaggagagcgaacttagggtt
gaggtcggcgccgattctccattccgcatccgcctcgtctccggcaccgctgagattttt
ggaaccgagcttccgccggagaactggctctccgtaccccctcgtcaaaagtttgctatt
tttacgtggcatggagctactgtggaagtagaaggaaccagcgaggtcgagtatgttgct
gatgagactcccatggtgagttatgtgaacgtacacgcgatactggatggcaggagagcg
cgggctaaggcatcgtctagtaacgatttcgttgcatcccagggtcctcgggttattgtg
gttgggcccacggattctgggaaaagtagtctgtgcaggatgcttctgagttgggcgtgt
aagctgggctggaagcctatgtttgtagatttggatattggtcagggatccattactatt
cctggatgtattgcttccactccaatcgaaatgcctattgacgctgttgaagggatacct
ctagaaatgcccattgtgtacttttatggacacacgactccaagcataaatggagaacta
tacaaggttcttgtgaaggagctagctcaaacactggagaggcatttctctgctaatgca
gagtctagggctgcaggcatggtgatcaacactttgggttgggtggaaggccttggttat
gagttgcttcttcatgcaattgacactttcaatgctagtgttgttcttgtcttagggcag
gaaaagctctatagcttgttgaaagatgtagcaaagaataatcctaatatggacattgta
aaacttcacaagtctgggggtgttgtttcaagaaacccaaaatttcggcagaaatctcgg
ggcttcaggattagggagtacttttatggcctcttcaatgatctgtctccgcattctaat
atcgtcagtttcagtgatataactgtctacagaattggtggtggtccacaggccccacgt
tcagcactaccaattggagctgagcctgtagctgaccctactcggctggttgctgttaac
ataaacagagacttacttcatttggttcttgctgtttcatatgcaaaggaaccagagcaa
ataatctctagtaatgttgctgggtttatctatgtcacggacatcgacatccagaggaag
aagatcacatatcttgctccttgcccaggtgagctcccaagcaagctgttgattgtagga
actttgacatggttggaaagctaa
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