Phalaenopsis equestris: 110030070
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Entry
110030070 CDS
T05601
Name
(RefSeq) zinc finger CCCH domain-containing protein 45
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
peq
Phalaenopsis equestris
Pathway
peq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110030070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peq03021
]
110030070
03019 Messenger RNA biogenesis [BR:
peq03019
]
110030070
Transcription machinery [BR:
peq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110030070
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110030070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
110030070
NCBI-ProteinID:
XP_020588276
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MEDPEGTLSFDFEGGLDAAAPLGPAGGSASFMPSDPTSAPIAVTAGNIGSATSESAAAGG
NISGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHT
NEDIKECNMYKFGFCPNGPECRYRHAKLPGPPPPVEEVFQKIQQLFNYGSSNRFFQHRNT
GYNQQMEKSQLPQGSAVTNQSAELKSPGSVEPLISQRQPQGQQSQQQETSQLQQQSHQLQ
QQNCSENQVQSITNGLPNQPNRTASPLPPGQSRYFIVKSCNRENLEISVQQGVWATQRSN
EAKLNEAFESIENVILIFSINRTRHFQGCAKMTSKIGGFIGGGNWKYAHGTAHYGRNFSV
KWLKLCELSFNKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLETDSELMQMLI
AAESKREEEKAKGASNTDDATENPDIVLFDDNEEEEEDESDEEDDSTVSAYGRGRGRGMF
WQPPIQLARGGRPVLGVRGFPPMMMGVDGYGYGTVGPEGFAPPDLFGGPPRIFPTYGGPR
FSGDFSGAGPMPGLVFPGRPPQSGIFPMGGLGMMMGSSRAFMGGIPIAGVGRSNRPIGIS
PFLHPPPPLPSNWASKREQRRPANERYESGSDQGHRGQETAGQDDEMGYQQGSRAHNEDR
FGSGNRYANDESESEDEAAPRRSRHGESKKRRGSEGDVAADHWEAPFTEASNH
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccggaagggaccctcagcttcgacttcgagggcggtcttgatgccgctgcc
cctctgggccctgccggcggatctgcgtctttcatgccctccgaccctacctctgcccca
attgccgtaactgccggcaacataggatccgcaacctccgaatcagctgccgccggaggg
aatatttcaggtcggaggagcttccggcagacagtgtgtcggcactggctccgcagcctt
tgcatgaagggggacgcctgcggctttctccatcagtacgataaagcccggatgccggtt
tgccggttcttccgcctctacggggagtgccgggaacaggattgcgtgtataagcacacg
aatgaggacataaaggagtgcaacatgtataaatttggattctgcccgaatggtcctgag
tgtcgctatagacatgccaaactccccggtcctcctcctcctgttgaagaagtctttcag
aagattcagcagctgttcaattatggttcttcaaacagattttttcagcaccggaatact
gggtataatcaacagatggaaaagtctcaacttcctcaaggttctgctgtaacaaatcaa
tcagctgaactcaaatctcctggttcggttgaaccgctaatttcacagcggcaaccccaa
ggtcaacaatctcaacaacaagaaacttcacaactacagcagcaatcacatcaactgcaa
caacagaactgtagtgaaaatcaggtccagagcattaccaatggcttgcctaatcaacct
aataggacagcatcacctcttcctccagggcaatctaggtactttattgttaaaagttgc
aatcgtgaaaacctggaaatttctgttcagcaaggtgtttgggcaacccaaaggagtaat
gaggctaaacttaatgaagcatttgagtctatagagaatgttattttgatattctcaatc
aaccgtactcgacatttccagggctgtgcaaagatgacttctaaaattggtggatttatt
ggtggaggcaattggaaatatgcacatggaacagctcactatggccggaatttctcggtc
aaatggctaaagctgtgtgaattgtctttcaataagacccatcatttgaggaatccctac
aatgacaacctaccagtgaagataagtcgagactgccaagagttggagccttttattggt
gagcagttggcttctcttctttatcttgaaacagacagcgaactcatgcaaatgctgatt
gctgcggaatctaaacgtgaggaagaaaaagcaaagggtgccagcaacacagacgatgca
actgaaaatccagatattgtattgtttgatgacaatgaagaagaggaggaagatgagagt
gacgaagaggatgacagtacagttagtgcatatggaagaggaagaggaagagggatgttt
tggcaacctccaattcaactagcacgtggaggcaggccagttcttggcgtccgaggtttt
cctcccatgatgatgggcgtagatggctatggttatggaactgttggtcctgagggcttc
gctccaccagatcttttcggaggacctcccaggattttccctacttatggcggcccgaga
ttttctggcgacttctctggagctggtcctatgcctgggttagtctttcctggtcgtcca
ccccagtctggcattttccctatgggtggactggggatgatgatgggttccagccgagca
ttcatgggcggaataccaatagcaggagttggaagatccaatcgtcccattggcatctca
cctttcctccatccacctccacctctaccaagcaactgggcttcaaagcgggagcaaaga
agacctgcaaacgaaagatatgaatctggatctgatcaaggacacaggggtcaggagaca
gctggtcaagatgatgagatggggtatcaacaaggatcaagggctcataatgaggacagg
tttggctcaggtaaccgatacgcaaatgatgagagcgaaagtgaggatgaggcagctccc
agaaggtcaagacatggggaaagtaagaagcggcgtggttcggaaggcgatgttgccgca
gatcactgggaagcccctttcaccgaagcttcaaatcattga
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