Phalaenopsis equestris: 110030090
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Entry
110030090 CDS
T05601
Name
(RefSeq) cell differentiation protein RCD1 homolog isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
peq
Phalaenopsis equestris
Pathway
peq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110030090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110030090
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110030090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
TBX2-3_RD
Motif
Other DBs
NCBI-GeneID:
110030090
NCBI-ProteinID:
XP_020588306
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MQRELSSVAIQSSRPLGDFMANLPTSLSINSPPYGGPAPSPLTTPAAAAAALAAVAVQSK
DRKMASAEQLVLDLCDPELRENALLDLSKKREIFQDLAPLLWNSFGTIAALLQEIVSIYP
SLSPPTLSPGASNRVCNALALLQCVASHSETRVLFLNAHIPLYLYPFLNTTSKTRPFEYL
RLTSLGVIGALVKVDDPDVISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVG
LRYICTTAERFFAVGTVLANMVVSLVEQPSTRLLKHIIRCYLRLSDNQRACEALQNCLPE
MLKDGTFNNCLRDDPATRRWLQQLLHNISGGSLVSALQPGGLEHMLGN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagaactgtctagtgtagcgatacagagctctcgtcctttgggcgacttcatg
gctaatcttccaacatctctctctatcaattccccgccttacggcggaccggcaccttct
ccgctgaccacgcctgccgctgcagccgctgccctggctgccgtcgctgtgcaatccaag
gatcgaaagatggcctcagcggagcagctcgtgcttgatctttgcgacccagagctcagg
gagaacgcccttctcgatctttccaagaaaagggagatatttcaggatttagctccttta
ttatggaactcttttggtactattgcagcactcctgcaggaaatagtatccatatatcct
tcgctttcaccaccaacattgtcccctggcgcatccaatagggtctgcaacgcacttgct
cttcttcagtgtgtggcttcacattcagaaacaagagttctttttctaaatgcacatatt
cccttgtatttatacccgttcttaaatacaaccagtaaaaccaggccatttgagtatcta
aggcttacaagcttgggagtaatcggggcccttgtaaaggttgatgatcctgatgttatc
agttttcttttgcaaaccgagataattcccttgtgcttgcgtactatggagatgggcagt
gagctctcaaaaacagtggccacctttattgtccaaaaaattcttctggatgatgttggc
ctgagatatatctgcaccacagctgagagattttttgctgttggaactgttttagcgaac
atggttgtatcacttgttgaacagccatctactaggttgctgaagcatataattcgttgt
tacctaaggctttctgacaatcaaagggcatgtgaggctttgcagaattgcctcccagaa
atgctcaaggatggaactttcaacaattgtcttcgagatgacccagcaaccagaagatgg
ctccagcagctgctgcataatatttcaggaggaagcttggtttctgcccttcagcctgga
ggtcttgagcacatgctgggaaactaa
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