KEGG   Phalaenopsis equestris: 110030208
Entry
110030208         CDS       T05601                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
peq  Phalaenopsis equestris
Pathway
peq03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110030208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:peq03021]
    110030208
   03036 Chromosome and associated proteins [BR:peq03036]
    110030208
Transcription machinery [BR:peq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110030208
   Coactivators
    SAGA/TFTC/STAGA complex
     110030208
Chromosome and associated proteins [BR:peq03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110030208
    STAGA complex
     110030208
    TFTC complex
     110030208
    SAGA complex
     110030208
    SLIK complex
     110030208
SSDB
Motif
Pfam: WD40 WD40_Prp19 TFIID_NTD2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C NBCH_WD40 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st Beta-prop_DCAF12 Cytochrom_D1 LisH_PAC1 VPS8_N LisH
Other DBs
NCBI-GeneID: 110030208
NCBI-ProteinID: XP_020588468
LinkDB
Position
Unknown
AA seq 658 aa
MEDEEIEKALFAYLKKKGFWQTERALQEEQSRISSATLTETALCRSERGPALYHDGYSKL
RTWAYGSLDLYKHELLRVLYPVFIHCFMDIIADGHMQEARAFFQSFREDHELMHLRDLRK
LEGILSPSHLEEMELARSLRHSKVNIKLCEYSYTLLLQYLRKAQSFTMLEVINEHINFEV
SSGQPVSITDDLDVLALVGNNQDLAKQVNQKEVHWGQLLEDTVEERLEKTLSDSEKVEGE
NKDMDVDDNKKRPADVGKQGASSKKLKKDKIVGAMGKGVRSETSTVSLAPRVKPELTLPI
MSNEMEQSILNDLRNRVQLNSMALPSICLYTFVNTHHGLNCVSISSDGSLLSGGFSDSSL
KVWDMSKMGQPLKAGPHSLGESESAPSELLVGLEEGKRAYTLFQGHSGPVYSSSFCPTGE
FILSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFGPLGHYFVSASHDRTARIWSMDR
IQPLRIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGESVRIFIGHRSMVLSLA
MSPDGRYMASGDEDGIVMIWDLSTGRCVTPLLGHNTCIWSLAFSCEGNIVASGSADSTVK
LWDVTSSNKAAKLDDIKGSTSSRLRLLKVFATRSTPVYTLQFSRRNMLFAAGAFSGDI
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggaggacgaggaaatcgagaaagcgcttttcgcttatcttaagaagaaaggtttttgg
cagacagagcgagcgctgcaagaagaacagagcaggatttcctctgctactctcaccgaa
acagctctttgccgatcagaaagaggcccagcattataccatgatggttatagcaagctc
aggacatgggcatacggttcattggatttatacaagcacgagctgctgcgggtactgtat
cctgtttttatacactgctttatggacattatagccgacggacacatgcaagaagcccga
gcattctttcaatctttccgtgaagaccatgaattaatgcatctaagggatctgcgaaag
ttagaggggatactctctccgtcacatttggaggagatggaactggctagatctttgaga
catagcaaagttaacataaaattgtgtgagtactcgtacactctacttttgcaatatctt
cggaaggctcagtcttttaccatgcttgaagtaatcaatgaacatatcaactttgaagta
tcgtcgggtcaacctgtctccattactgatgacttggatgttttagctcttgtgggaaat
aaccaagatttagcaaagcaagtaaatcaaaaagaagttcattgggggcagttattagaa
gatactgtcgaagaaagattagagaagacattatccgattcggagaaagttgaaggcgaa
aacaaagacatggatgttgatgataataagaaaaggcctgcagatgtaggaaagcaaggt
gcttcttctaaaaaacttaaaaaggacaagattgttggtgcaatgggtaaaggtgtccga
tccgagactagtacagtttcgttggctccaagggtgaaacctgaactcactttaccgata
atgtcaaatgaaatggagcagtctattctcaatgacttgaggaatcgtgtccaattgaat
agcatggcattgccatccatatgcttatacactttcgtcaacacgcatcatggattgaat
tgtgtgtcgatttcttctgatggctcattgcttagtggaggtttttccgattcatctttg
aaggtatgggacatgtcaaaaatgggccagcctcttaaggcaggaccccattcgctggga
gaaagtgaatccgctcctagcgagcttttggttgggttggaagagggtaaaagagcttac
acgttgttccagggtcattcaggaccagtttattcttcttcattttgtccgacgggggaa
tttatcttgtcttcttcttccgactcaacaatccgactatggagcaccaagttgaatgct
aatctggtctgctataaaggacacaattatcctgtgtgggatgttcagtttggtccactt
ggtcactacttcgtcagtgcttcgcatgatcgaaccgctaggatttggtcaatggataga
attcaaccattaagaataatggctgggcatctctctgatgtcgattgcgttcgatggcat
gcgaactgtaactacatcgccactggttcgagcgacaaaacggtaagattatgggatgta
cagagcggcgaaagcgtgcgaatatttatcggccacagaagcatggtgttgtcgttggca
atgtctcctgacgggcggtatatggcttctggagacgaggacgggattgtcatgatatgg
gatctctccactgggcgttgtgtcacaccgcttttgggccataacacctgcatctggtct
ttggctttcagctgtgagggaaatattgttgcttctggatctgctgatagcactgtcaaa
ctatgggatgtaacttctagcaacaaggcagcaaaactagatgatatcaaaggtagcacc
agtagcaggctcagattactgaaagtttttgcaacaagatcaactccagtctatacattg
cagttctcccggaggaatatgttatttgcagccggtgccttctcgggagacatctga

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