Phalaenopsis equestris: 110030694
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Entry
110030694 CDS
T05601
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
peq
Phalaenopsis equestris
Pathway
peq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110030694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110030694
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110030694
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110030694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
BAR_4
Motif
Other DBs
NCBI-GeneID:
110030694
NCBI-ProteinID:
XP_020589197
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPREKAKAETRDWLNNVVGDLESQIDNFEAEIEGLSVKKGKARPPRLAHLETSIVRHKA
HIMKLELILRLLDNDELSHEQVNDVRDFLEDYVERNQEEPDEFNDVDELYSSLPLDKVEA
LEELVSHGPSSLVKGVGSVSTIKNSNNAAQDQSEETTSQDINTDITPRTPPSKTTAIGSP
TTAAPSAVALGPSAGSNSAATSNASVRPSVVGPTATSIFSGPVRGASDGLSATAPLVNSS
GLVKEDDIITFPGRRSPAIPEIGLGRGPNRVPSNQASISTPISLTSVGISSSGALSSVPA
ASDLSKRTVLTVDERISSAALAQPLASAISNRMLPMQVSQANEGTTSIDSNNLVESPIVG
GRVFSPSAVSGVQWRPQSATSFQNQSETGQLRGRPEIAPDQREKYLQRLQQVQQQGHSSL
LSVPHLSGANSKQFLMQQQSALLQAGIGLNVQPPGLAAATSVQQQLQSPMHKQSQHHVLP
ATGTKETDTGNSKVDELQQQTLLDDLNVEPASTALDKGINDDDPKSAFSVSGSTSIVDAT
QLPRGTDLSPGQLLQSSQSSANLGVIGRRSVSEHGAIGDNLNGLAVNSGGLHDQNYNLQM
LEAAFFKLPQPKDSQRVKNYMPRHPAVTPASYPQTRAEILENPAFWERLGMDQFGTDTLF
FAFYYQQNSYQQYLAARELKRLSWRYHRKYNTWFQRHEEPKVTTDEFEKGTYVYFDFHIA
DDNQQQGWCQRIKTDFTFEYNYLEDDLVL
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgagccggaagcttcagggtgagatcgatcgggtgttgaagaaggtccaggag
ggtgtcgacgtcttcgacagcatctggaacaaggtgtacgacacggagaatgcaaatcag
aaggagaagtttgaggccgatttaaagaaggagatcaagaagctccagcgataccgagat
cagatcaagacatggatacagtccagtgagataaaggataagaaggttagtgcctcttat
gagcaggctctgatggatgctcgaaaacttattgagcgtgaaatggaaaggtttaaggtc
tgcgagaaggaaaccaaaacaaaagccttctctaaggaaggcctaggtcaacagccaaaa
actgatccaagagagaaggccaaagcagaaacaagggattggctaaacaatgtggttggg
gatttggagagtcagattgataactttgaagctgagatcgagggactatctgttaagaag
ggaaaggctaggcctcctcggctggcacatttggagacatccattgtgagacataaggct
catataatgaagttggagttaattttaaggttgcttgataatgatgagctgagtcatgag
caagtcaatgatgtccgagatttcttagaagactatgtggagcgtaatcaagaggagcct
gacgagtttaatgatgttgacgaactttatagctctctaccattagacaaggtggaagcc
cttgaagaacttgtttcacatggtccgtctagtcttgtaaagggcgtcggttctgtttct
actattaagaattccaataatgctgctcaagaccaaagtgaagaaacaacttctcaggat
attaatactgacattactccaagaaccccaccttcaaaaaccacagcaatagggtctcct
acaacagcagctccatctgctgtagctttggggccatcagctggatccaattctgctgcc
acttctaatgcttctgtgcgtccatctgttgttgggccaactgcaacatcaatattttct
ggtcctgttcgtggtgcctccgatggtttatctgccactgctccgcttgtaaactcttct
gggttagttaaggaagatgatatcatcaccttccctggaaggagatctcctgcgatccct
gagataggactgggaagaggtccaaacagagtaccatcgaatcaagcatctattagtact
cccataagcttaacctcagttggcatttctagctctggggctcttagttctgtccctgca
gcttccgacttgagcaagagaactgttctaactgttgatgagagaatttcaagcgctgct
cttgctcagccattggcttctgctataagtaatcgaatgctaccaatgcaggtttcacaa
gctaacgaggggacgacctcaattgattccaacaatctggtagaaagtcctattgttggt
ggaagagtcttttcaccctctgctgtcagtggagtccaatggaggcctcaaagtgcaact
tcctttcagaatcaaagtgaaacaggacagttgcgtggtagaccggagattgctccagac
cagagggagaagtatctgcagcgtctccaacaagtgcagcaacaaggccatagttctctt
ctcagcgtccctcatttaagcggggctaattccaaacaattccttatgcaacaacagagt
gctcttttacaggctggaatagggcttaatgttcagcctcctggtttagctgctgctaca
tctgttcaacagcagttgcagtctcccatgcataaacaatcacaacatcatgtattgccc
gcaactggaacaaaagaaactgatacgggtaactctaaagtagatgagctgcaacagcag
actctgttggacgatttgaatgtggaacctgcaagtactgctcttgacaagggtatcaac
gatgatgatcccaagtcagcattttcggtctcaggttctacatctatagttgatgctact
caattgcccagaggtacggatctttctccagggcaactattgcaatcaagccagtcttct
gctaatctcggtgtcattggtagaagaagcgtttcagaacatggtgccattggtgacaac
cttaatggtttggccgtgaattctggcgggcttcatgatcagaactataatttgcagatg
cttgaagcagcctttttcaagcttcctcagcccaaggattcacaacgagtcaagaattat
atgccgagacatcctgctgtgactcctgctagctatcctcagactcgagctgaaattctt
gaaaatccagctttttgggagaggttgggtatggaccaatttggtactgatacattattc
tttgcgttttactaccaacagaactcttaccaacaatacttagcagcaagagaactgaag
cggctatcctggaggtaccataggaaatataacacatggtttcagcgacacgaagaacct
aaagttacaacggatgaatttgagaaaggaacatatgtgtattttgattttcatattgca
gatgataatcaacagcaaggatggtgccagcggattaaaacagacttcactttcgagtac
aattaccttgaagatgaccttgtgttatag
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