KEGG   Phalaenopsis equestris: 110030834
Entry
110030834         CDS       T05601                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
peq  Phalaenopsis equestris
Pathway
peq03020  RNA polymerase
peq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110030834
  09124 Replication and repair
   03420 Nucleotide excision repair
    110030834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:peq03021]
    110030834
   03400 DNA repair and recombination proteins [BR:peq03400]
    110030834
Transcription machinery [BR:peq03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110030834
DNA repair and recombination proteins [BR:peq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110030834
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 110030834
NCBI-ProteinID: XP_020589424
LinkDB
Position
Unknown
AA seq 204 aa
MAERGHMDKGKGTKDKGKKKVFPNWAVRKPRSVPKPTNLASTSVIDISSDSDDSASVEEI
SPPRCAPPHPPRTKKKEQHEAEIPPDAKLLLDCEAADILQEIHEKLAKLEDLIMPVAFDK
ALLQTKDGIRYSNTKDVRETVETLKEYGVTDWEICMIANAGPKTCEEAYAMIPSLRDKED
GISGPLNAVLAKLAFLKLKDVDRV
NT seq 615 nt   +upstreamnt  +downstreamnt
atggcggagagaggacacatggacaaaggcaaaggaaccaaagacaaaggcaaaaaaaag
gtttttccgaactgggctgtgagaaagccaagatctgtgccaaaaccgaccaacttagcc
agcacttcagtcatcgatatatcctccgattccgatgattcagcttctgttgaagaaata
agcccacctcgatgtgctcctcctcatcctcctcgtactaaaaagaaagagcaacatgaa
gctgaaatccccccagatgccaaattacttctagactgcgaagcagcagatattctgcaa
gagattcatgaaaagttggccaaactcgaggatctcataatgcccgttgcttttgacaaa
gcgctgctgcagacaaaagatggcattcgttatagtaatacgaaagatgtcagagaaact
gtggaaactctgaaggaatatggtgtcacagattgggagatctgtatgatagcgaatgct
ggtccgaagacttgtgaggaagcttatgcaatgataccttctttgagggataaagaagat
ggcattagtggtcctcttaatgctgttctggccaagcttgcatttctcaagcttaaggat
gtggatcgagtttag

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