Phalaenopsis equestris: 110030855
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Entry
110030855 CDS
T05601
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
peq
Phalaenopsis equestris
Pathway
peq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110030855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peq03041
]
110030855
Spliceosome [BR:
peq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110030855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Gbeta
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
PRP4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Nbas_N
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
110030855
NCBI-ProteinID:
XP_020589458
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDEEELQNLTLNPIPSNDPSPPPPLSMLPTPPPIAPIPILRPRIATSTPAAASDSDREGS
LPPHRSEDYEISDESRLARERHEKAVQDLLMKRRAFAMAVPTNDVSVRARLRRLGEPVTL
FGEREMERRDRLREIMLKLDNEGQLERLLKAHEEEQQTIAVPAEDEGPQVYPFYTEGTRE
LLESRMKIAKYSLAKAAARLERARRRRNDPDEDEDAEAMEVVGQAKELALECSEIGDDRP
LTGCSFSHDGTLLATCAWSGITKIWSMPQVSKQTTLKGHTERATDVVFSPVANILATASA
DRTAKLWKSDGSFLKSFDGHLDRLGRIAFHPSGNYLGTASFDKTWRLWDIDTGTELLLQE
GHSRSVYAVSFHPDGSLAASCGLDSLVRVWDLRTGKSILAMEGHVKPVLGICFSPNGFRL
ASGGEDNCCRIWDLRKRKCEYTIPAHSNLISQVKYEPQEGYFLATSSFDTKAVVWSAQDF
KPIKTLSGHESKVTGLDITADGQHIATVAHDRTIKIWSSRSNGKQKAMDID
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaagagctccaaaacctaaccctaaacccaatcccttccaatgacccatct
ccacctcctccactctccatgctgcccactccccctccaattgcccccatacccattctc
cgcccccgcatcgccacttccaccccagctgccgcctcagattccgatcgcgagggctcc
ctcccccctcatcgctccgaagactatgaaatttcagatgagagtcgcctcgcccgggag
cgccatgagaaggctgtgcaagatttactcatgaagcgccgagctttcgcaatggccgtc
cctaccaacgatgtctcagttcgcgcccgccttcgccggcttggtgagcccgttacactc
ttcggagagcgcgagatggagcgccgtgatcggctccgagaaattatgctcaagttagac
aacgagggacagctcgagcgccttcttaaggcgcatgaagaggagcagcagacgatcgca
gtgcctgcggaggatgaagggccgcaggtgtacccattttatactgaggggactcgagag
cttttagaatcgaggatgaagattgcaaagtattcattggctaaggcagctgcgagattg
gagagggcgaggaggaggagaaatgatccggatgaggatgaagatgctgaggccatggag
gttgtgggacaggctaaggagttggcgcttgaatgtagtgagatcggtgatgatcgtcca
ctgactggatgctctttttcgcatgatggaacgcttctcgccacatgtgcttggagtgga
atcactaaaatatggagtatgcctcaagtatccaaacaaacaaccttaaaaggtcacaca
gagcgtgcaactgacgttgtattttctcccgtggctaacattttagcaactgcatcagct
gatagaaccgctaaactatggaaaagtgacggatcattcttgaaatcctttgatggccat
ctcgatcggcttggtcgaattgcctttcatccgtctggaaactacctcggaaccgctagt
ttcgataaaacatggagactttgggacatcgatacaggaacggagttacttctccaagaa
ggccatagtcgtagcgtctatgccgtatccttccatccagatggatctctggccgcatcg
tgcggcctcgattcacttgttcgtgtttgggaccttcgtacaggaaaaagcattctcgca
atggaaggccatgttaagccagttttgggaatttgcttctctcctaatggatttcgttta
gctagtggtggagaagataattgttgccgtatttgggatctgaggaagagaaaatgtgaa
tatacaattccagcgcattcaaaccttatttctcaagtgaagtatgagccccaagaaggt
tattttctggcgacctcttcatttgatacaaaggcagtggtttggtcagctcaagatttc
aagcctattaagactctatctggccatgaatcaaaggttacaggattggatattacagct
gatggacagcacattgcaacagttgctcatgaccgcaccatcaagatctggtccagtaga
agtaatggaaaacaaaaggcgatggacattgactaa
DBGET
integrated database retrieval system
