Phalaenopsis equestris: 110036050
Help
Entry
110036050 CDS
T05601
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
peq
Phalaenopsis equestris
Pathway
peq03030
DNA replication
peq03420
Nucleotide excision repair
peq03430
Mismatch repair
peq03440
Homologous recombination
peq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110036050
03420 Nucleotide excision repair
110036050
03430 Mismatch repair
110036050
03440 Homologous recombination
110036050
03460 Fanconi anemia pathway
110036050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
peq03000
]
110036050
03032 DNA replication proteins [BR:
peq03032
]
110036050
03400 DNA repair and recombination proteins [BR:
peq03400
]
110036050
Transcription factors [BR:
peq03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110036050
DNA replication proteins [BR:
peq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110036050
DNA repair and recombination proteins [BR:
peq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110036050
MMR (mismatch excision repair)
110036050
DSBR (double strand breaks repair)
HR (homologous recombination)
110036050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
BRC-2_C
Motif
Other DBs
NCBI-GeneID:
110036050
NCBI-ProteinID:
XP_020596054
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MANSVTPGAISTLLSNPSPDSTSETGQIIVQVVDLKPIGSSTTRFTFMASDGSMRLKAML
PTHFSSEVNSGKLQNLGLIRILDYTCNTIPNQPDKALIVTKCEIVSAALGSEIKCQTEET
TTLLKSKQEIVPKSAAQIVHEQRINAAPAARLSMTRRVHPLCSLNPYQGNWTIKVRVTNK
GNLRTYRNAKGEGQVFNVELTDDDGTQIQATMFNEAAKKFYLKFDLGKVYYISKGTLRLA
NRQFKTVQNDYEMNLNENSIVEEAQGESAFIPETKYNFVKIDQLGLYVNGREIIDVIGVV
QNVSLTLSVRRKSNNETIPKRDITLADESNMTVAVSLWNDLATTIGQELLDLVDTAPVVA
IKALKVGDFQGVSLSTLTKSTVQINPDLPEAKALRSWYGSNGKDVTMAPIGSTLNSISTR
TGQRSMYSDRVFLSHIINDPTLGQEKPVFFSIKAYVSFIKQDQTMWYRACKTCNKKVTDA
VGSGYWCEACQKNDDQCSLRYIMVMKISDSSGEAWASVFNEQAEKIVGCTADELDRIKFE
EGEDKFQLKLKEATWIPHLFRVSVSLSEYMNERRQRITVRAQAPIDCSAEIRYMLEEISK
IAIS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattcagtgactccaggagcaatctcgactcttctttccaacccttcgcccgat
tctacgtcagagactgggcagataattgtgcaagtcgtcgatctgaagccaattggtagc
agcaccacccgtttcacctttatggccagtgatggtagcatgaggctcaaggccatgtta
ccgacacatttttcctctgaagtcaattctggaaagcttcagaatcttggccttattcgc
attctagattatacatgcaataccatccctaaccaacctgataaggccttgattgtgact
aaatgtgagattgtttctgctgcacttggttctgagatcaaatgtcagaccgaggagaca
acaacactgttaaaatccaaacaagaaatagtgccaaaatccgcagcacaaattgtgcat
gagcagcgtattaatgctgctcctgccgctcgtttgtcgatgactagaagagtccatcct
ctttgttccttgaatccctatcagggtaactggaccataaaagtaagagtgacaaataaa
ggtaatttaagaacctataggaatgccaaaggggaaggtcaagtctttaatgtagaactg
acagatgatgatggcacccagatacaggctacaatgtttaatgaagctgcaaaaaaattc
tacctgaagttcgatcttggcaaagtttactacatttccaaaggaacactgaggctagca
aacaggcagtttaaaactgttcaaaatgattatgagatgaacctgaatgaaaactctata
gttgaagaggcacaaggggagagtgctttcatcccagaaaccaaatataacttcgtgaag
attgaccaattagggttatatgttaatggccgggagattatagatgttatcggcgtggtt
cagaatgtttctctaactttaagtgttcgaaggaaaagcaataatgaaacgattcctaag
agggacataactcttgcagatgaatcaaacatgactgttgctgtgtctttatggaacgat
cttgctactaccattggccaggaattactggacttggttgatactgcgcctgttgtagca
attaaagcacttaaagttggagacttccaaggtgtatctctgtcaacgctcaccaaaagc
accgtgcagattaatccagatttgccggaggcaaaagcacttaggtcttggtatggctcc
aatggcaaggatgtaacaatggcgcccataggttccactttgaattccatctcaacgagg
actggacagagatctatgtactctgatagagttttcctatctcacattattaatgaccct
acgttaggccaagagaagcccgtctttttcagcataaaagcttatgtcagctttatcaag
caagatcagacaatgtggtatcgtgcttgtaagacttgcaataagaaggtaacggatgct
gtaggatctgggtactggtgtgaagcatgtcagaagaatgatgaccaatgctctttaaga
tatataatggtgatgaagatttcagattcatcaggtgaagcttgggcttctgtcttcaat
gagcaagcagaaaaaattgttggttgcactgctgatgaacttgacaggataaagtttgag
gagggagaggataaattccagctcaagctaaaagaagcaacatggattcctcatcttttc
agggtaagcgtctcgctatctgagtatatgaatgagaggaggcaaaggataactgttaga
gcccaggcacctatagattgctctgctgaaataagatatatgctggaagaaatctcaaag
atcgcaatttcttaa
DBGET
integrated database retrieval system
