Phalaenopsis equestris: 110037024
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Entry
110037024 CDS
T05601
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7-like
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110037024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peq03041
]
110037024
Enzymes [BR:
peq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110037024
Spliceosome [BR:
peq03041
]
Complex C
Other components
Step II factors
110037024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
110037024
NCBI-ProteinID:
XP_020597248
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
FDKHVCFCSVIVMDEAHERSLSTDVLFGILKKVVAQRWDLKLIVTSATLNAQKFSNFFGS
VPIFHIPGRTFPVNILYSKTPCEDYVEAAVKQAMTIHIASPPGDILIFMTGQDEIEATCY
ALAERMEQLSTSTAKAVPKLSILPIYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLT
VDGIFYVIDTGYGKIKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESA
YQNEMLATPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQENILNSMYQLWVLGAL
NNFGGLTEIGWKMVEFPLDPPLAKMLLMGEELECLNEVLTIVSMLSVPSVFFRPKDRAEE
SDAAREKFFVAESDHLTLLNVYLQWKANQYRGDWCNDHFLQVKGLRKAREVRSQLLDILK
TLKIPLTSCGMDWDVVRKAICSAYFHNSARLKGVGEYVNCRNGMPCHLHPSSALYGLGYT
PDYVVYHELILTTKEYMQCATAVEPQWLAELGPMFFSIKESDTSMLEHKKRKREEKTAME
AEMENLRKDQAEFQRVSKEKEREKRTKQQQQVVMPGLRKGSSTYLRPKKFGL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
tttgacaaacatgtttgcttttgcagtgttatagtaatggatgaagcacacgagaggtcc
cttagcacagatgtcttgttcggcatattgaaaaaggtagttgctcagagatgggactta
aagctcatagtgacatctgccacgttgaatgcccaaaagttctccaacttcttcggaagt
gttcctatattccacattcctggaagaacgttccccgttaacatcctctacagtaaaact
ccatgtgaagattatgttgaggctgctgtgaagcaggccatgactatccacatagctagt
cctccaggcgacatcctcatcttcatgaccggacaagatgaaatcgaagcaacctgttat
gctctcgccgagcgaatggagcaactgtcgacatccactgcgaaggcagttcccaagcta
tccattctacccatctattcccagctgcctgcagacctgcaagcaaagatcttccagaag
gctgaagatggtgcaaggaaatgcattgttgccaccaacattgcagagacctcgctaact
gtggatgggatcttttatgttatagacacaggctacgggaagattaaagtttacaacccg
aggatgggcatggatgctctccaagtttttccagtgagtcgagctgctgcagaccaacga
gcagggagagcaggaagaactggcccgggaacatgctatcgcttatacacagaatctgcc
taccagaatgagatgttagccacccctgtgcctgagatccagcgaaccaaccttggtaat
gtggtgttactgctcaagtccctgaaagtcgagaacttgttggattttgacttcatggat
ccgcctccacaggagaacatcctcaattccatgtaccagctctgggttttgggcgctttg
aacaattttggaggactcactgaaataggatggaagatggtggagttccctttggatcca
cctctagcgaagatgctgttgatgggggaggaattggaatgcctaaacgaagtcctcacc
attgtttcgatgctttctgtaccatctgtcttcttcaggcccaaggatagggctgaggaa
agcgatgctgcaagggagaaatttttcgttgcggagtccgatcacctcacgcttctcaac
gtctatttgcaatggaaggcaaaccagtatcgaggagactggtgcaacgatcacttccta
caggtgaagggtcttcggaaagccagggaagtaagatcccaactgctcgacatactaaaa
acactaaagattccgctcacttcttgtgggatggattgggatgtggtgaggaaggcaatc
tgttccgcatattttcataactccgcgagattgaaaggtgttggggagtatgtcaattgt
agaaatggcatgccttgccatcttcatccgagtagcgctctatacgggcttggatacaca
ccggattatgtggtttatcatgaactgattctgacaaccaaggaatacatgcaatgtgcc
actgcagtagagccacaatggcttgcagagttaggaccaatgttcttttctattaaggag
tctgatacttcaatgcttgagcataagaagaggaaaagggaagagaagactgcaatggag
gctgagatggagaatctgcgaaaggatcaggcggagtttcagagagtgagcaaggagaaa
gagagagagaagaggactaagcagcagcagcaggtggtaatgcctggtcttaggaagggt
tcttcaacatatctcagacccaaaaagtttggattgtaa
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