Phalaenopsis equestris: 110038823
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Entry
110038823 CDS
T05601
Name
(RefSeq) pre-mRNA-processing protein 40C isoform X1
KO
K12824
transcription elongation regulator 1
Organism
peq
Phalaenopsis equestris
Pathway
peq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110038823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peq03041
]
110038823
Spliceosome [BR:
peq03041
]
Complex A
U1 snRNP components
U1 related factors
110038823
Complex B
110038823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Glyco_hyd_101C
WW_2
UBA_N4BP2
Motif
Other DBs
NCBI-GeneID:
110038823
NCBI-ProteinID:
XP_020599393
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MSSELLVVPEAQVPALSMQSETAESTVSKPTCSLTSSEGGPSSNVAVPVTESPTINSGSE
EIVTVSPPPMSSPAQRAIHGTASDSLQDSVRAKFVSSPGYVVPPPSFSYSIFPRVNFASG
APQQTSSSPALKLTPQMSPAALQPPVPGQSLGNRPSFSYSVVPLPNASPVSGQQFQPAAV
NNQRQLLTGNSVPPSPSMAAACLQPQVPCQPICPDASISATVPQNFPPPIQLPVPPPKGQ
LSPSTNFSFGGGSRPTIMDASVKYLPSNTCTSDATPLDIGMTSVSASLDSKVSHDKHASS
SIGSTISPISNVSSMLPPTGSLINGHLPMVEIFTDNNLPKTPNPATVQPAKPGTSSATMR
PIQHNQVLAPSSQSSITNPTPPNVPQQIYPHLPSMQAQILPSHAHWLPPQATGVQCLPLS
QYPAVLPGPSSFSLRGMPPPSVPFPDVRPPGVFPEVNCGEASSSTLESSFPVMNTGAGSP
HDAASEKEVNDTQEDGNSKSEELEAWTMHRTETGVLYYYNTISGESTYERPSKFKGEPEK
IALQIIPVSWEKLSGTNWSLVTTNDLKKYYYNTVNKVSSWQVPAEVLEMRKKQVVNSSIE
GIASIPTDKGTTSVSLNAPALQTGGRDSMTQRTPSGQASTSALDLIKKKLQDSATPNVSA
PLQTSAPSASDLNGSRVIDASAKAQQLLNSKDRVKDANGDGNMSDSSSDSDDEESGPTKE
ECIDQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAVPSYSARRAIFEQYVRTRAEEERK
EKKAAQKAAIIGFKQLLEEALEVDMTHRPDYQTFKRKWGDDPRFEAIERKEREFLFNEKV
LLRKKAAEEKIHAERAASMSCFKSMLKERQDISSISRWSKVKDNLRNDPRYKTVNHEERE
ALFNEYMAELRAVEQEAERAAKAKKEEQDKLKEREREMRKRKEREEQEMERIRLKVRRKE
AVSSYQALLVETIKDLKASWTESKPKLEKDPQGRATNPDLNQADAEKLFRDHVKDLYERC
ARDYRALLAEIITSDSVARSAENEKNVLNSWSEAKRVLKPDPRYSKMPRKDRESLWLRFA
DSMMRKQKAGAEPKDKFDSQGKNRSSTDNSLRGSPRGSRARR
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagaacttttggtggtgccagaggcacaggtaccagctttgtccatgcagtca
gaaactgctgagtcaactgtttcaaagcctacttgcagtctaacatcatcggagggtgga
ccaagcagtaatgttgcagttccagttacagaatctccaactataaattccggctcggaa
gaaatagtaactgtatcgcctcctcccatgagctcaccagctcaaagggctattcatggt
actgcaagtgactcattacaagattctgttcgggcaaaatttgtttcctcacctggctat
gttgtccctccaccttctttttcttacagtatatttcctagggtgaactttgcctctggg
gcccctcagcaaacttcgtcttctcctgctttaaaattaactccccaaatgtctccagct
gctctacagccgccagttcctgggcaatctttaggaaatagaccatctttttcatacagc
gttgttccactaccaaatgctagccctgtttccggtcagcagtttcaacccgccgctgtg
aacaatcaaaggcagctgttgactggaaattctgtcccaccttcaccatcaatggctgct
gcatgtttgcagcctcaagtaccctgccaacctatttgccctgatgcatccatttctgca
actgttccacagaattttccaccacccattcagttaccagttccccctcccaagggccag
ctatcaccttcaacaaacttttcttttggtgggggttctaggccaacaataatggatgct
tctgtcaagtatttgccatccaacacatgcacttctgatgcaacgcctttggatattggc
atgacttcagtttctgctagtttagattcgaaggtgtctcatgataagcatgcaagttca
tccataggctcaacaatctctcctatttctaacgtatcaagcatgttgccgccaactggt
tctttgataaatggtcatcttccaatggttgaaatttttactgacaataatctgcctaaa
acacctaatcctgctactgttcaaccagcaaagcctgggacttcatcagcaacaatgaga
cctattcagcataatcaagttcttgcaccttcaagtcaatcttctatcacaaacccaact
ccaccgaatgtacctcaacaaatttatccacatttgccttcaatgcaggcccaaatacta
ccttctcacgctcattggcttcctcctcaggctactggggtacaatgtcttcccttgtca
caatatccagctgtgcttcctggtccttcctctttctcactgaggggcatgcctccaccc
tcggttccttttcctgatgtacgacctcctggtgttttccctgaggtgaactgtggagaa
gcatcttcctccacgctggagtcatcctttcctgtaatgaatactggagcaggatcacct
catgatgctgcttctgaaaaggaagttaatgacactcaggaggatggtaacagtaaaagt
gaagaattagaagcttggacaatgcacagaactgagacaggtgttttatattactacaat
actatttcaggagaatctacttatgaaaggccttccaagttcaaaggagagcctgagaag
attgcacttcagattattccagtgtcatgggaaaaattatctggcactaactggtcattg
gtcacgacaaatgatttgaagaagtactattataacaccgtgaacaaggttagtagctgg
caagttcctgcagaggttttggaaatgagaaaaaaacaagtagtaaactcttcaatagaa
ggaattgctagcattcccacagataagggaacgacatctgtcagtctgaatgctcctgct
ctgcaaactggggggcgagattctatgacccagagaactccaagcggacaagcatctaca
tcagcattggatttgataaagaagaagctgcaggattctgctacgcctaatgtttcagca
cctcttcaaacttcggctccctctgcatctgatttaaatggatcaagagttatagatgcc
tcagctaaggcgcagcaactgttgaatagtaaagacagagttaaagatgctaatggagat
ggaaatatgtcagattcctcatctgattcagatgatgaagaaagtggaccaacgaaggag
gagtgcattgatcagttcaaggagatgctcaaagaacgaggggtggctccattctcaaaa
tgggagaaagaactaccaaagatagtcttcgatccacgctttaaggcagttccaagttat
tctgctagacgagcaatctttgaacaatatgttaggacacgtgctgaggaagaaaggaag
gagaagaaagcagctcagaaggctgcaattattggtttcaaacaactattggaagaagcc
ttggaggttgatatgactcacagaccagactatcaaacatttaaaagaaaatggggagat
gatccacggtttgaggccatagaacgaaaagaaagagagtttcttttcaatgaaaaggtg
ctgctaaggaagaaggccgctgaagaaaagattcatgctgaaagagcagcatctatgagc
tgcttcaagtcaatgctgaaggagaggcaagacatatcttcaattagtcgatggtcaaag
gtgaaggataatttgagaaatgatccaagatacaagactgtcaatcatgaagagagggaa
gctttatttaatgaatatatggcggaacttagagcagtggaacaagaagcagaacgtgct
gctaaggccaaaaaggaggagcaggacaaactaaaagaaagagagagggaaatgcggaag
agaaaagagagagaagagcaagaaatggaaaggattaggctgaaagttcggaggaaggag
gctgtcagttcctatcaagccttgttggtagaaacaataaaagatctgaaggcgtcctgg
actgagtcgaagcccaagctggagaaggatcctcagggtcgggctacaaatcctgatctt
aatcaagctgatgcagaaaagcttttccgtgatcacgtgaaggatttgtacgagcgctgt
gcccgtgattatcgagccctattagctgaaatcatcacatcagattcagttgcgcggagt
gcagaaaatgagaagaatgttctcaactcgtggtcagaagctaaacgcgttttaaagcct
gatccaagatactctaagatgccaaggaaagacagggaatctttatggctcagatttgcg
gacagtatgatgagaaagcagaaggctggagctgaaccaaaagacaagtttgattcccaa
ggaaagaacagaagctctactgataatagtttgcggggatcaccgaggggttctcgtgct
cggagataa
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integrated database retrieval system
