Phalaenopsis equestris: 110038936
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Entry
110038936 CDS
T05601
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03013
Nucleocytoplasmic transport
peq03015
mRNA surveillance pathway
peq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110038936
09122 Translation
03013 Nucleocytoplasmic transport
110038936
03015 mRNA surveillance pathway
110038936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110038936
03041 Spliceosome [BR:
peq03041
]
110038936
03009 Ribosome biogenesis [BR:
peq03009
]
110038936
03012 Translation factors [BR:
peq03012
]
110038936
Enzymes [BR:
peq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110038936
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110038936
mRNA cycle factors
Stress granule specific factors
110038936
Spliceosome [BR:
peq03041
]
Complex C
Other components
EJC/TREX
110038936
Ribosome biogenesis [BR:
peq03009
]
Eukaryotic type
90S particles
Helicases
110038936
Translation factors [BR:
peq03012
]
Eukaryotic type
Initiation factors
eIF-4
110038936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
StrH_N
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
110038936
NCBI-ProteinID:
XP_020599525
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAAVVAAPVRGRPTRLEDDNLVFETTPGVEAITSFDQMGIRDDLLRGIYAYGFEKPSAIQ
QRAIMPIVSGRDVIAQAQSGTGKTSMIALSVCQMVDTSTREVQALILSPTRELAAQTEKV
ILAIGDYINVQAHACIGGKSIGEDIRKLEYGVHAVSGTPGRVCDMIKRRTLRTRSIKLLI
LDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEITSKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVS
SMHGDMPQKERDAIMLEFRSGATRVLITTDVWARGIQQVSLVINYDLPNNRELYIHRIGR
SGRFGRKGVAINFVRKDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtggtggcggctcctgtccgtggccgtcctacgcggttggaggacgacaac
ctggtattcgagacaaccccgggcgttgaggccattacgagcttcgatcagatggggatc
cgtgatgatctccttcgtgggatctacgcctacggctttgagaaaccctcggcgatccag
cagagggccatcatgcccatagtgagcggccgcgatgttatagcccaggctcagtctggg
accggcaagacctcaatgatcgccctctccgtctgccagatggtcgacacatccacacga
gaagtgcaggcattgattctatctcctacaagagagcttgctgcccagactgagaaagtc
atattagcaatcggtgattacataaatgtgcaagctcatgcttgtattggtggaaagagc
ataggagaggatatcagaaaactggaatatggagttcatgcagtctcaggaactcctgga
agagtttgtgacatgatcaagagacggaccttaaggacaagatcaattaaattgctaatt
cttgacgaatcagatgagatgttgagcagaggttttaaggatcaaatatatgatgtttac
agatatcttcctccagatctacaggttgttctgatatctgctacacttcctcatgaaatt
ttggaaataactagcaagttcatgacggaccctgtgagaatacttgtcaagcgtgatgaa
ctaacgcttgagggtatcaagcaattctttgttgctgttgagagggaggagtggaaattt
gatactctgtgtgatctctatgacacccttactatcacccaagctgttattttctgcaat
actaaaagaaaggttgattggctgacagaaaagatgagaagtaataacttcacggtgtct
tccatgcatggtgacatgcctcagaaagaaagggatgcaattatgttagagttcaggtca
ggtgcaactcgtgtgttaattacaaccgatgtatgggctcgaggcattcagcaggtgtcc
cttgtgataaattatgatcttccaaataatcgtgagctgtatatacatcgcatcggccgt
tccggtcgatttgggcgcaagggtgttgccattaactttgtgcgcaaggatgacatcaag
attctgagagatattgaacagtattacagtactcaaatcgatgaaatgcctatgaatgta
gctgaccttatttga
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integrated database retrieval system
