Phalaenopsis equestris: 110039069
Help
Entry
110039069 CDS
T05601
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110039069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peq03019
]
110039069
03012 Translation factors [BR:
peq03012
]
110039069
Enzymes [BR:
peq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110039069
Messenger RNA biogenesis [BR:
peq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110039069
Translation factors [BR:
peq03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110039069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
nSTAND3
AAA_19
Ank_5
ATPase
AAA_22
AAA_23
ResIII
AAA_7
AAA_11
PhoH
Rad17
T2SSE
R3H_PUS7L
Sigma54_activat
Ank_2
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
110039069
NCBI-ProteinID:
XP_020599673
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MTGQSFKKGRGKQQENHAFLKESSRVRVGKILEAFRESDGEVYTFEPDLSKKERAAVHEM
CRKMGMISRSSGNGANRRLSVYKSKKKQKNNKEEELVTSLCFSEESKAVIQDIFIRYPPD
SGELSENILQNCSNAVYSAHWKQDICFSRPSICKDEIKKKMELLALRKNDDSNFRKTAED
IAKLPIASYVNAITSALEAHQVVLISGETGCGKTTQVPQYILDHMWSKAETCKVVCTQPR
RISAISVAERISYERGEAVGETVGYKIRFESKGGKNSSIMFCTNGILLRLLIGRGANASE
MAKKKGSKKDTLLEITHIIVDEIHERERFCDVLLVILRDLLPAYPHLRLILMSATIDVER
FSQYFSGCPVIQVPGFTYPVKTYFLEDVLSILRLTDENHLFTAALSSVEEVVPLTEEYKT
ALDESINLALFNDELEPLLEIIRTQQNPQVFSYQHSLTGVSPLMVLSGKGRVGDVCMMLS
FGADCSLTNNEGKSAMDCARQENQLQICEIIERHMEKDVSKSAEEEDLLNNYLASINPEN
IDTVLIERLLKRICTDSSEGAILVFLAGWADINQTRERLLASGLFKDSSKFMILSLHSMI
PIVEQKKVFKHPPQGVRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYSNVSTFHA
SWISKASAKQREGRAGRCQPGICYHLYSKVRAAALPDYQVPEIKRMPVEELCLQVKLLNP
NYSLIEFLQKTLDPPVIETIRNAVIVLQDIGALTEDEQLTELGEKLGALPVHPSTSKMLL
FAILMNCLDPALTLACATDYREPFLLPMDPDEKKKAGAAKVELASLYGGYSDQLAVVAAF
ECWKNAKHSGEESQFCSRYFVSLSTMNMLQNMRKQLQNELMKAGFIPEDMSGCSLNAQDP
GILRAVLVAGTYPMVARFLTQKKNNKSAIVETASGFKVFLHPHSSNFKLSFAKSAVSPII
VYDEITRGDGGLFIKNSSVVSPYSLLLLAVEMAVAPARETYGDGEKDSDTSSGEEEDMDV
KASSEQHKNQLMSSPDNAVTIVIDRWLKFSWTALDVAQIYCLRERLAEAVLFKVKKPRAI
LPPALGASMHAIACILSYDGHPHILALDESIDPQEAMWEPTDLNIQSRERKVGAVTPSRY
LKSLFSNYGRQTSVNFNRLHVSASPLMSMPASTSSAPKVPLPRITSAKARDHGSHPIPKK
KLFKRRRGKLGGAPR
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtcaaagttttaagaaagggagaggcaagcagcaggagaatcatgcctttctg
aaggagtcctcgcgagttcgagttgggaaaatccttgaagcgttccgcgaatccgatgga
gaagtttacacatttgaacctgatttatcaaaaaaagagcgggcagcagttcatgaaatg
tgcagaaaaatgggaatgatatcaagaagctctggaaatggtgccaatcgccgtctttca
gtttacaaaagcaaaaagaagcagaaaaacaacaaggaagaagagttggttacctctctg
tgcttttctgaagagtcaaaagctgtgattcaagatatttttatacgctatccacctgat
tctggagaattaagtgaaaatattttacaaaactgtagcaatgcagtttatagtgcgcat
tggaagcaggatatttgcttttcaaggccttcaatatgtaaggatgaaattaaaaagaaa
atggagctgcttgcattaaggaagaatgatgactcaaactttagaaagactgcagaagat
atagctaaacttccgattgcatcctatgtgaatgctataacatcagctttggaagctcac
caggtggtactgatatctggtgagactggttgcggtaaaactactcaggttcctcagtat
attttggatcacatgtggagtaaagccgagacatgtaaagttgtgtgcacacaaccaagg
cgtatttcagctatttcagttgccgagaggatctcatatgaaaggggagaagctgttgga
gaaactgttggttataagataaggttcgagtccaaaggtgggaaaaattcttcaataatg
ttctgcacaaatggcattcttttgagattactaattggcagaggtgcaaatgcatcggag
atggcaaagaaaaagggatcaaaaaaggacactcttctcgagataacccacataatagtg
gacgagattcatgagcgagagaggttttgtgatgtattgctggtaattctcagggatttg
ctgcctgcttatcctcatctacgtttgattctcatgagcgccacgattgatgtggagcga
ttttcacaatacttcagtggctgtcctgtcattcaggttccaggatttacataccctgtg
aagacttattttttggaagatgtgctatctattttaagattaacagatgagaatcactta
tttactgctgcccttagtagcgtggaggaggttgttccattaacagaagagtacaagacc
gcccttgatgagtcaattaatttggctttatttaatgatgaattggagcctttactggaa
ataattagaacccagcaaaacccccaagttttctcctaccaacactctttgactggagtg
tcaccattgatggtgctttctggcaaaggtagagttggtgatgtttgtatgatgctttca
tttggtgccgactgctctttgactaacaatgagggaaagtcagccatggattgcgctcgg
caagaaaatcagctccagatctgtgaaatcattgaaagacacatggaaaaagatgtgtcc
aaatcagccgaagaggaggacctactgaacaactacctagcaagtatcaatcctgaaaat
attgatacggttctaatagagcgtttgttaaaaaggatatgtaccgattctagtgaaggg
gctatcttagtgtttcttgctggatgggctgatatcaatcaaactagagaaaggctactt
gcttcagggctttttaaagattcctcaaagttcatgatactttctctccattccatgatt
ccaatcgtagagcaaaagaaggttttcaagcatcctcctcaaggcgtccgaaaaattatt
ctttctacgaatattgctgagactgcaattactattgatgatgttgtttatgttatagac
tctggtcgaatgaaagagaaaagctatgatccttacagcaatgtatcaacattccacgct
tcatggatttcaaaagctagtgctaagcagcgggaggggcgtgctggtcgttgccagccg
ggaatttgttatcatctctattctaaagtccgtgctgctgctttgccagattaccaggtt
ccagaaattaaacgaatgccagttgaagaattgtgtttgcaggttaaactgcttaatcca
aattatagtttaattgagttccttcagaaaaccttggaccctcctgtcattgagacgata
agaaatgcagtcattgttcttcaagatattggagccttaaccgaggatgaacagcttaca
gaactcggggaaaaacttggtgctcttcctgttcatccttcaacaagcaagatgcttctg
tttgctatcttgatgaattgtcttgatccagctttaactctagcttgtgccactgactac
agagagccctttcttcttccaatggatccagatgagaaaaagaaagcaggtgcagccaaa
gttgagctggcttcattatatggtggttacagtgatcaacttgctgttgtagcagcattt
gaatgttggaagaatgcaaagcacagcggtgaagaatcacaattttgctccaggtatttt
gtttcattaagtaccatgaatatgttacagaacatgcgaaaacagcttcagaatgaactt
atgaaggctggctttattcctgaagatatgtctggctgtagcttaaatgcccaagaccca
ggtatcttgagagcagtgctcgtggctggaacatatccaatggtggcaaggtttctcact
cagaaaaaaaataataaaagtgcaattgtggagactgctagtggttttaaagtttttttg
catcctcattcctccaatttcaaattgtcttttgcaaaatctgctgtcagtccaattatt
gtctatgatgagataactcgtggggatggaggcttatttataaagaacagttctgttgtt
tcgccttattcattattattgcttgctgtggagatggctgttgctcctgcacgtgaaaca
tatggggacggtgagaaggattcagacacgtcaagtggagaggaagaagatatggatgtg
aaagcatcatcagagcagcataaaaaccaactcatgtcatctcctgataatgctgtcacg
attgttatagatagatggttaaaattttcttggactgctcttgatgttgcccagatttac
tgcttgcgtgagcgattagcagaagctgtgctgttcaaggtgaagaaaccacgggcaatt
ctcccgccggcacttggagcctccatgcatgcaattgcttgcatcctctcatatgatggg
cacccccacatattagctttagatgaatccattgatcctcaggaagcaatgtgggagcct
actgacttgaacatacagagtcgggaaagaaaagttggagcggtcactcccagtagatac
ttgaagtcactgttttcgaattatggcaggcaaacctcagtaaactttaacaggctccat
gtatcggcttccccgctcatgtcaatgcctgcttctacttcctccgcaccgaaggttcct
ctgccgaggataacttctgcaaaagctcgagatcatggcagtcatcctattccgaagaaa
aaattatttaaacgccgccgaggtaagttgggaggagcacccaggtga
DBGET
integrated database retrieval system
