KEGG   Phalaenopsis equestris: 110039512
Entry
110039512         CDS       T05601                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
peq  Phalaenopsis equestris
Pathway
peq03030  DNA replication
peq03410  Base excision repair
peq03420  Nucleotide excision repair
peq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110039512
   03410 Base excision repair
    110039512
   03420 Nucleotide excision repair
    110039512
   03430 Mismatch repair
    110039512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:peq03032]
    110039512
   03036 Chromosome and associated proteins [BR:peq03036]
    110039512
   03400 DNA repair and recombination proteins [BR:peq03400]
    110039512
DNA replication proteins [BR:peq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110039512
  DNA Replication Termination Factors
   ELG1-RFC complex
    110039512
Chromosome and associated proteins [BR:peq03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110039512
DNA repair and recombination proteins [BR:peq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110039512
  Check point factors
   HRAD17(Rad24)-RFC complex
    110039512
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 RuvB_N Mg_chelatase AAA_assoc_2 AAA_16 AAA_5 AAA_11 AAA_14 ResIII AAA_24 AAA_2 SLFN-g3_helicase nSTAND3 PhoH AAA_28 AAA_19 T2SSE AAA_7 AAA_30 AAA_25 RNA_helicase AAA_18 Parvo_NS1 DUF815 NPHP3_N IstB_IS21 TIP49 DNAX_ATPase_lid bpMoxR NB-ARC CPG4
Other DBs
NCBI-GeneID: 110039512
NCBI-ProteinID: XP_020600262
LinkDB
Position
Unknown
AA seq 340 aa
MAPLIPSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGMRQGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMS
SRILHICNEEGLSLDQEALSTLSSICGGDLRRAITYLQSTARLYGSSISSKELISVSGVI
PQDVVQTLFAACKTGEFDAANKEVSNVISEGYPVSQMLSQFFELIVSSDDISDVQKSRIC
KRLAEADKCLVDGADEYLQLLDVASHSMRALCDSQEMQFD
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggcacctctaattccgagttcacagccatgggtggaaaaataccggccgaagcaagtg
aaggacgtagcgcaccaggaagaggttgttcgggttctcaccaacacgctagagactgcc
aactgccctcatatgctattctatggacctcctggaacgggcaaaaccacaacggctctt
gccattgcacaccagctgtttggtccggaattgtacaaatcacgagtactagaactaaat
gcaagtgatgatcgtgggatcaatgtcgtacggacaaaaataaaggattttgctgctgtt
gctgtgggttctggtatgcgccaaggtggctatccttgcccaccatacaaaatcatcatc
ttagatgaagcagattcaatgactgaagatgctcagaatgcgttgagacgtactatggag
acttattccaaagtcacaaggtttttcttcatttgtaactacataagcagaataattgaa
ccactggcctcaagatgtgcaaaattcagattcaaacctctctccgaagatgtcatgagt
agtcgtatcttgcatatctgcaatgaggaaggccttagtctggatcaagaggcactatca
actttgagctccatctgtggaggggatcttcgccgtgctataacgtacttgcagagtacc
gctcgcttgtatgggtcttcaatttcatccaaggagttaataagcgtttctggggtgata
cctcaggatgttgttcagaccctgtttgcagcttgtaagactggggagtttgatgcagct
aacaaggaagttagtaatgtgatttcagagggatatccagtatcacaaatgctatctcag
ttctttgaactgattgttagctcggatgacatatctgatgtacagaagtcaaggatatgt
aagaggttagctgaggcagataagtgtttagttgatggggcagacgagtacctgcagctg
ctggatgtggccagtcattcaatgcgcgctctttgtgacagtcaggagatgcagtttgat
tag

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