Peptoniphilus equinus: O6R05_00025
Help
Entry
O6R05_00025 CDS
T09392
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pequ
Peptoniphilus equinus
Brite
KEGG Orthology (KO) [BR:
pequ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pequ03032
]
O6R05_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
pequ03400
]
O6R05_00025 (gyrB)
Enzymes [BR:
pequ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
O6R05_00025 (gyrB)
DNA replication proteins [BR:
pequ03032
]
Prokaryotic type
DNA Topoisomerases
O6R05_00025 (gyrB)
DNA repair and recombination proteins [BR:
pequ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O6R05_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
WBW49990
LinkDB
All DBs
Position
2539..4473
Genome browser
AA seq
644 aa
AA seq
DB search
MTEKNSHYGAENIQVLTGLEPVRKRPGMYIGSTGQKGLHHLIYEVVDNSVDEALAGRCDT
IAVTLNDNGSVSVIDNGSGIPTAIHPQTKKSTVETVLTILHAGGKFSNDAYKVSGGLHGV
GVSVVNALSTELIAEVKREGKLHRQTFARGKSTSKLEIIDTVSEEDTGTKITFTPDGEIF
DTLEFDADILIKRFREMAFLNKNITIIFTDLRGVSDGDEGHREVFHYEGGLKSFVEFINK
KKNAIHKDVVYMDREKDGVDVEIALQYTDAYSETVISFANNINTEEGGSHLSGFKSALTR
TINDYGRTNNLIKDKEDNLSGDDVREGISAVISVKLPNPQFEGQTKAKLGNSEIKGVVES
VFAEGLSDFLDVHPKIGKAILDKALSARRAREAARRARDLSRKKNIMDSMTLPGKLSDCQ
MAGKDGTEIYLVEGNSAGGSAVDARDSVFQAILPLRGKIMNVEKARLDKMLASEEIKAMI
TAFGTGIGEDFDITKLRYEKIIIMTDADVDGAHIMTLLLTFFFRYMRPLIEEGHVYVAKP
PLFGIMKGIKPLRYVYDEKELKRALDEMGRDKKFDIKRYKGLGEMNAEDLWETTMDPEKR
ILLKVELNDLVQADETFDMLMGSEVEPRREFIEDNAIFVENIDA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaaaattcacattatggcgccgagaatattcaggttttaaccggacttgaa
ccggttcgtaagcgtccgggcatgtatattggttccacgggtcaaaaaggtctgcaccat
cttatttacgaagtggtggataactccgtggatgaagccttggccggccgatgcgatacc
attgccgtcacattgaatgacaacggttcggtgagcgttattgacaatggttcagggatt
cctacagctattcatcctcagacaaaaaagagtacggtggaaaccgtcctgactattctt
cacgccggtgggaaattttcaaacgacgcctacaaagtttccggcggtctccatggcgtt
ggggtgagtgtggtcaatgctctatctacagagcttattgccgaggtcaagcgggaaggc
aaacttcaccgtcaaacttttgctcgaggcaaaagtaccagtaaactggaaattattgat
actgtatcggaagaggacacagggacaaaaattacctttactccggatggggaaattttt
gacactctggaatttgatgcggatattctcataaagcgtttcagagagatggcctttctc
aataaaaatatcacgattatttttaccgaccttcgaggtgtgagtgatggcgatgaagga
catagagaagtcttccactatgaaggcggtttaaagagttttgtggaatttattaataaa
aagaaaaatgcgattcataaagatgttgtctatatggaccgggaaaaagacggtgtggat
gtggaaattgctttgcagtataccgatgcatattccgaaactgtcatttcttttgccaat
aatattaacaccgaagaaggcggcagccatttaagcggtttcaagtccgcccttactcgt
accattaatgactacggtcggacaaataatctcataaaagataaagaagataacctctct
ggagacgatgtgagagaaggtattagtgcggtcatcagcgtgaagcttcccaatccgcag
tttgaaggtcaaaccaaggcaaaattgggtaattccgaaatcaaaggggtcgttgaatct
gtttttgctgaagggttaagtgattttctcgatgtccatccgaaaattggaaaggctatt
ttagataaagcgctttctgctcgacgtgcgagagaagcagctcgacgggctcgagatctt
tctcgcaaaaaaaatattatggactctatgacgctgccgggtaaactttcagattgtcag
atggcaggtaaagatgggacggaaatttatctggtggagggtaactctgcaggcgggagt
gccgtagatgcgagagattcagtttttcaagcgattcttcctcttcgaggaaaaattatg
aatgtggaaaaggcgagattggataaaatgcttgccagtgaagaaatcaaagctatgatt
accgcctttggtacaggcattggggaagacttcgacatcactaagctaagatatgaaaaa
attattattatgactgatgcagatgtggacggtgcccatattatgacgctgcttcttacg
ttcttcttcagatatatgcgtcctctcattgaagaaggtcatgtctatgtggctaaaccg
ccactctttggtattatgaaaggtatcaagccactgcgttacgtctatgacgaaaaagaa
ttaaaacgtgccttagatgagatgggacgagataagaagttcgatatcaagcgctacaaa
ggtcttggggaaatgaatgccgaggatttatgggagactaccatggatccggaaaagcgg
attttactcaaagtggaactcaacgatttggtacaggctgatgaaacttttgatatgctc
atgggttctgaagtggaacctcgacgggaattcattgaagacaatgccatttttgttgaa
aatattgatgcgtaa
DBGET
integrated database retrieval system
