Peptoniphilus equinus: O6R05_03855
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Entry
O6R05_03855 CDS
T09392
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pequ
Peptoniphilus equinus
Pathway
pequ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pequ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6R05_03855 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pequ03019
]
O6R05_03855 (rny)
Messenger RNA biogenesis [BR:
pequ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O6R05_03855 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
ApoO
Herpes_UL25
Motif
Other DBs
NCBI-ProteinID:
WBW50695
LinkDB
All DBs
Position
786016..787554
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AA seq
512 aa
AA seq
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MFTLEFLFIILGLIIGTAIGFAVRKYIAEGKINTAEAQAIKIITDAEHQAEAKKREVLLE
AKDEIHKLRSDNEKEYKVRRSELQSLESRILNREEAVQKKADSLERKEEKLVARLDDAKI
KQEQAKALVEKRELELERVAGLTAEEGKQILLSQLESEITQESALIIKENEQRVKEESTK
YAQNVIAQAIQRVAADQVAEATVSVVQLPNDEMKGRIIGREGRNIRSIESLTGVDLIIDD
TPEAVVLSCFDPIRREIARVALEKLVQDGRIHPTRIEETVEKARKEVETLIKESGEQAAY
DAGVHGLHPEIIKYLGRLKYRTSYGQNVLKHAVEVSNIAGILAEEIGLDPKLAKRGGLLH
DIGKSIDHDVEGPHVDLGVDIARRYKESDVVINCIEAHHGDVEFKCVEAILVTAADAISA
ARPGARRETVESYVKRLEKLEEIATSFDGIEKSYAIQAGREVRIIVKPEVISEAEITLTA
RKIVKEIEAQLDFPGQIKVNVIRETRAVDYAK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgtttactttggaatttctatttattattcttggtttaataattgggactgccattggc
tttgccgttcgaaaatatattgcagaagggaaaattaatactgccgaagctcaggctatt
aagattatcacggatgcagaacatcaagctgaagctaaaaaacgcgaagttcttttagaa
gctaaagatgaaatccacaaattgcgctcagataatgaaaaagaatacaaagttcgccgt
agtgagttacaatctttggaaagtcgtatactcaaccgtgaagaagctgtacaaaagaaa
gctgattcccttgaaagaaaagaagaaaagttagttgcacgtcttgatgatgctaagatt
aagcaagaacaagccaaagctcttgtggaaaaacgagaactggagctggaacgcgttgca
ggtttaactgctgaggaaggtaaacaaattttgctcagccaactggagtctgaaattact
caagaatctgcactgattatcaaagaaaatgagcaacgcgtgaaagaagaaagcactaag
tacgcacaaaatgtgattgcccaagctattcagcgagtggctgctgatcaagttgctgaa
gcgacagtctctgtcgttcagttacctaatgatgaaatgaaaggtcgtatcataggtcgc
gaagggcgcaatattcgcagcattgaatcgttaacaggtgttgatctcattattgatgat
acgcccgaagcggtggtactatcatgttttgatccgattcgtagagaaattgctcgggtg
gcgttggaaaaattggtacaagatgggcgcattcatccgacgcgtattgaagaaacggtt
gaaaaagcgcgtaaagaagtggaaacactcatcaaagagtccggtgaacaagcagcttac
gatgctggtgttcacgggttgcatcccgaaattatcaaatatttagggcgcttaaaatat
cgtaccagctatggacaaaatgtgttgaaacacgctgtagaagtatcgaacattgcaggt
attttagctgaagaaatcggtttagatcctaagcttgccaaacgtggcggtttacttcac
gatattggaaagagtattgatcatgacgtggagggacctcatgtggatcttggtgtcgat
attgcgagacgctataaggaatctgacgttgtcatcaattgtatcgaagcacatcatggt
gacgttgagttcaaatgtgtggaagctattcttgtgactgcagctgatgccatcagtgcg
gcaagacccggagctcgccgtgaaacggtagaatcttatgtcaaacggttggagaaattg
gaagaaattgctacatcctttgatgggattgaaaaatcctatgctatccaagcgggacga
gaagttcgcattattgtaaaacctgaagttatttctgaagcggaaattacgctgacagct
cgtaaaattgtcaaagaaattgaagcacaattggatttccccggacagatcaaagtcaat
gtcattcgggaaactcgcgctgtcgactatgcaaaataa
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