Peptoniphilus equinus: O6R05_04900
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Entry
O6R05_04900 CDS
T09392
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pequ
Peptoniphilus equinus
Pathway
pequ03030
DNA replication
pequ03410
Base excision repair
pequ03420
Nucleotide excision repair
pequ03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pequ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O6R05_04900 (polA)
03410 Base excision repair
O6R05_04900 (polA)
03420 Nucleotide excision repair
O6R05_04900 (polA)
03440 Homologous recombination
O6R05_04900 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pequ03032
]
O6R05_04900 (polA)
03400 DNA repair and recombination proteins [BR:
pequ03400
]
O6R05_04900 (polA)
Enzymes [BR:
pequ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O6R05_04900 (polA)
DNA replication proteins [BR:
pequ03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
O6R05_04900 (polA)
DNA repair and recombination proteins [BR:
pequ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
O6R05_04900 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O6R05_04900 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
TcdB_toxin_midC
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WBW49351
LinkDB
All DBs
Position
complement(1018956..1021607)
Genome browser
AA seq
883 aa
AA seq
DB search
MGKILIIDGSSLFFRAFYALPLLKTKRGIYTNALYGFVQMLENAIDKIAPTHVVVCFDMK
GKTFRSEIFKDYKGTRQKTPSELEQQFPLVREVLKRMNMPVLESPVYEADDIAGTLSKMA
EDAGMQSILLTGDKDYFQLVSPKTQVLLTRKGITEMDVVDVAYLRDEYDLEPGQFIDLKA
LMGDASDNIPGVPGIGIKTGLKLIHEYTTLENLYDSLEGMKATKQKEKLVENKIQAFMSK
KLGTIVRTVPLDVSLEDLQRQAYDYDTLADLYREYELTTLLHRLPEAYQKEEINAVSEDV
LKVRDVQPDQLAAEIQRAGSFAFHFITDGKIYRGVTPLLLGVKVKDMAPTVLTFSETMLQ
TLKPVFEDGSIEKLGHGIKEDLLILMYYGVAIAGLVHDGEIAAYLLNATQSNYDIAHVAQ
QYLATTFKDEEELLGKGAKRKAFGDLADDELSDYLAFYLNACYQLYEVQHDKLEEQGMHE
LYNKVELPLAEVLASMELVGIHTDVAVLDAIGADLEAKIEALTTSIHKQAGETFNIGSPK
QLGTVLFEKMGLPVMKKTKTGYSTSVEVLEKLVEADPIIADILAYRKFTKLKSTYVDGLR
AIINPLTGRIHSNFNQTVAATGRISSQDPNLQNIPIKNEEGRLIRKAFLASDGCKLVDAD
YSQIELRVLAAITGDEHMIQAFNEGIDIHRKTASEVFKRPLDEVTSHERSQAKAVNFGIV
YGISDYGLSQNLNIPRKVAKEYIDNYLDNFKGIKAYMTDEVAEAKKRGYVETILHRRRYI
PELSAKNFNIRQFGERVAINMPIQGSAADIIKIAMVKVYARLKKQQMKSRLILQIHDELV
VDAAADEVEAVKTLMHELMEHAVDMDVELLIDMNVGDNLYETK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaattctgataatagatggttcgtccttattctttcgtgctttttatgcgttg
ccgctcttaaagacgaagcggggcatttatactaatgcactttatgggtttgtgcagatg
ctggagaatgctatcgacaagattgcgccgacccatgtggtggtgtgttttgatatgaag
ggcaagacttttcgctcggagatatttaaagattataaggggactcggcaaaagacaccc
agtgagttggagcagcagtttccgttggtgcgggaagtactgaagcgcatgaatatgccg
gtgctggaatcgccggtttatgaagctgatgacattgcgggcacgctatcaaaaatggcg
gaggacgccggtatgcaatccattcttctcaccggggataaggattattttcagttggta
tcgccgaagactcaagtgctcttaacgagaaagggcattacagagatggacgtggtcgat
gtagcctacctccgcgatgagtatgaccttgagccgggacaattcatcgatttgaaggca
ctgatgggcgatgcctcggacaatattcccggtgtgcccggcattggcattaagacaggc
ttgaagcttattcatgagtatacgaccttagaaaatctctatgacagtttggaaggcatg
aaggcgacgaagcaaaaggaaaagcttgttgaaaataaaattcaggctttcatgtcaaaa
aaactgggcactatagtacgcaccgtccctctggacgtgagcctcgaagatttacaaaga
caagcctatgactatgatactctcgccgatctctatcgcgagtatgagttaacgaccttg
ctccatagacttccggaagcttatcaaaaggaagagataaacgccgtcagtgaggatgtg
ttgaaagttcgagatgtgcaaccggatcaattggcggcagagattcagcgcgcaggatcc
tttgcgtttcactttattaccgacggcaagatctatcgcggggtgacaccgctgttactt
ggagtgaaggtcaaagatatggcgccaacggtcttgactttttcagagaccatgcttcaa
accctaaagccggtctttgaagatggcagtatcgaaaagttgggccacggcatcaaagag
gacttgctcattctcatgtactacggtgtggcgatagccggtttggtacacgatggggaa
attgccgcatacctcctcaatgcgacacagtccaactatgacattgcccatgtggcacaa
caatatttggcgaccacgtttaaagatgaagaggagctcctggggaaaggtgctaagcga
aaggcttttggcgatttggccgacgatgagcttagcgattatctggctttttatctcaat
gcctgctaccaattgtatgaggttcagcatgacaagctggaagaacaggggatgcatgaa
ctttacaacaaggtggaactgcctctggccgaagtacttgcttccatggagcttgtcggc
atccacaccgatgtggcggtattagatgccatcggcgcggatttggaagcgaagattgag
gccttgacgacgtctattcacaaacaagcaggtgagacctttaacattggttcaccgaag
cagttgggcactgttctttttgaaaaaatgggtctgccggtgatgaaaaagacaaagacc
ggctattccacatcggttgaggtgctggagaagctggtcgaggccgatcctatcatcgcc
gacattttagcctatcgcaagtttaccaagttgaagtctacctatgtcgatggcttacga
gctattatcaatcctcttaccggccggattcactctaacttcaatcagacggtggccgct
accgggagaatttcgtctcaagatccgaatcttcaaaatattcccattaaaaatgaagag
ggccgtctgatccgaaaagcttttctggccagtgacggatgcaagttggtagacgcggat
tattcacaaattgagctgcgtgtgcttgccgccatcaccggagatgagcacatgatccaa
gcttttaatgaagggatcgacattcatcgcaagactgcctcggaggtctttaagcggcct
ttagacgaggtgacaagtcatgagaggtctcaggcaaaggcggtgaatttcgggattgtc
tacggtatttccgattacggtctttctcagaacttaaatattccgagaaaagtggctaag
gaatacattgataattatctggacaactttaaaggtatcaaagcatatatgacggacgaa
gttgctgaagcaaaaaagcgaggctatgtcgaaaccatactccatcgtcgtcgctacatt
cctgaactcagtgcgaaaaatttcaatattcgtcagttcggtgagcgggtagccatcaat
atgccgattcagggttcggcggcagatattattaaaattgccatggtcaaagtctatgca
cgcctaaaaaaacaacagatgaagagccggctgattctgcaaattcacgacgaattggta
gttgatgcggcggcggatgaagtggaggcggtcaaaacgctgatgcacgaacttatggag
cacgccgtagatatggatgtggagcttcttatcgatatgaatgtgggagataatctctat
gaaaccaagtaa
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