Peptoniphilus equinus: O6R05_05035
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Entry
O6R05_05035 CDS
T09392
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pequ
Peptoniphilus equinus
Pathway
pequ02020
Two-component system
pequ02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pequ00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O6R05_05035 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
O6R05_05035 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pequ03021
]
O6R05_05035 (rpoN)
Transcription machinery [BR:
pequ03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O6R05_05035 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WBW49377
UniProt:
A0ABY7QRH5
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All DBs
Position
complement(1056299..1057591)
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AA seq
430 aa
AA seq
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MKLDLQMQPKLNISTKFIQSLEVLSMNIFELDRFLKEESEENVMLDFTSRLEQDNYVNRL
KSSLQSVTYGDNPIEELAYNAEGLQDYLLSQLRDLDVERDIRLIIHYLILNLDESGYLTM
SLDEVADVLLQPEARVANAHSILLTLDPPGVGARHLSECLISQIDRSDTVLVRLIQDHLE
DIAQNKWQKIAKQMGLSISEVQSLTATIKRLNPKPGQVYQGDRTVEYVIPEIFVSVARQD
IAIHMDLEKTIHLNDYYLNLLSQNIDEDTKAYLHNRLNRSALIMKSVDMRNQTLRDVAAY
IITYQKDFFIYNLPLQPLRMKDVADVLSLSISTVSRAVKGKYLEYYQGVMPLKDLFTPMT
LHNSVSQDYIKHRIKHRIDAEDKVHPLSDNKLVALLNEEGITIKRRTVQKYRDAMHIPSS
QMRRRDDRTV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaattggatttacaaatgcaaccgaaattaaatatctccacaaaattcatccaatcc
ctggaagtactttccatgaatatctttgagctggatcgattcttaaaagaggagagcgaa
gagaatgtgatgttggatttcacatcgagattggagcaagacaactatgtgaaccgttta
aaatcctcacttcaaagcgtcacgtatggggataatccgatagaagagcttgcttacaac
gctgaggggttgcaggactatttgttgtcgcaacttagggacttggatgtggagcgcgat
atacggcttatcatccattacttaattttgaatttagacgagtcggggtatctaacgatg
tctcttgacgaggtcgccgacgtgttgttgcagcctgaagcgcgtgtggcaaacgcgcac
agcatactgttgacgttggatccgccaggggtgggtgcacggcacttgtcggaatgtctc
atcagtcaaattgatcgctccgataccgtattagttcggttgatccaagaccatttggaa
gatatcgcgcaaaataaatggcagaagattgcgaaacaaatgggcctatctataagcgag
gtgcagagtttaactgcaaccataaaaaggctcaatccgaaaccgggacaggtctaccaa
ggagatagaaccgttgagtatgtcattccggaaatatttgtcagcgtggcacgccaagac
attgctatacatatggatttggagaagactattcacttgaatgactattatttgaacctg
ctttctcaaaatattgacgaggacacgaaagcctatttacataacagattaaatcgaagt
gccctgattatgaagtccgtcgatatgaggaatcaaacgctgagggatgtggcggcatac
atcattacataccaaaaagacttctttatatacaacctcccattacaacctcttaggatg
aaagatgtggcagatgtgttaagcctttccatttccacggtctcaagagcagtcaaagga
aaatacttggaatattatcaaggtgtcatgcctttaaaggatttatttacacccatgacg
ttacacaacagcgtctctcaagactacataaaacatagaattaaacaccggattgacgcc
gaagacaaagttcatcctctctcagacaacaaattggttgcactgctgaatgaagagggc
attaccatcaaacgcagaactgttcaaaaatatcgtgatgcgatgcacataccgtcatct
caaatgcggcgcagagatgatcggacggtttaa
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