Pantoea eucrina: LAC65_02965
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Entry
LAC65_02965 CDS
T07862
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
per
Pantoea eucrina
Pathway
per03030
DNA replication
per03430
Mismatch repair
per03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
per00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAC65_02965 (dnaE)
03430 Mismatch repair
LAC65_02965 (dnaE)
03440 Homologous recombination
LAC65_02965 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
per03032
]
LAC65_02965 (dnaE)
03400 DNA repair and recombination proteins [BR:
per03400
]
LAC65_02965 (dnaE)
Enzymes [BR:
per01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAC65_02965 (dnaE)
DNA replication proteins [BR:
per03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAC65_02965 (dnaE)
DNA repair and recombination proteins [BR:
per03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAC65_02965 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UBB13816
LinkDB
All DBs
Position
658772..662254
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMVDGLAKTGPLVKKAAALGMPAIAITDYTNLCGLVRFYGSAHGA
GVKPIIGADFQVASELMGDELTQLTLLAANNTGYQNLTLLISRAYQRGYGIAGPILDRDW
LIELGEGLIVLSGGRRGDVGRSLLRGNNALVAQCLSFYQQHFPDRYYLELLRTGRADEES
YLHAAVELAIAEGIPVVATNEVCFINEEDFDAHEIRVAIHDGYTLDDPKRPRHYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGEMTTEEFLVVKSREGL
EERLAFLFPDEELRAQKRPAYDERLEIELNVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFQAEPQ
LPEIYDADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDENGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLPPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFKEGAESMGINGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINAGLYPFHVNDDGEIVYGIGAIKG
VGEGPIEAILEARNQGGYFKELFDLCARTDTRKINRRVIEKLIMSGAFDRLGPHRAALMS
ALSDALKAADQHAKAEATGQADMFGVLAEEPEQVEKSYASITPWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGMRLKDMHPTERGKVTIAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARAKLRFGAAWRISPSD
RLLNDLRSLVGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctcgttttatacatctgcgcgtgcacagcgactactccatggtcgatggc
ctggcgaagaccggtccgctggtgaaaaaagccgcggcgctggggatgccggcaatagcg
attacggattacaccaacctctgcggcctggtgcgcttctatggcagcgcccacggtgcc
ggcgttaagccgattatcggcgctgatttccaggtcgccagcgagctgatgggcgatgag
cttacgcagcttacgctgctcgcggcgaataacaccggctatcagaatctgacactgctg
atttcgcgcgcctatcagcgcggctacggcattgccgggcctatcctcgatcgcgactgg
ctgattgagctgggcgaagggctgattgtcctgtcgggcggacgacgcggcgatgtcgga
cgcagcctgctgcgcggcaataacgcgctggtggcgcagtgtctgagcttttatcagcag
cactttcccgaccgttactaccttgagctgctccgcaccggacgcgccgatgaggagagc
tatctgcatgccgctgttgagctggcgatagcggaagggataccggtagtggcaaccaat
gaagtctgcttcatcaatgaagaggacttcgatgcgcatgagatccgcgtggcgatccac
gacggttatacgctggacgatccgaaacgtccgcgccactacagtcctcagcaatatatg
cgcagcgaagaggagatgtgcgagctgttttcggacatcccggaagcgctggaaaacagc
gtagagattgctaagcgctgtaacgtcaccgtccgcctcggcgaatattttctgccgcag
ttcccgaccggcgagatgaccaccgaagagtttctggtggtgaaatcacgcgaggggctt
gaagagcgcctggcgtttctctttccggatgaagagctgcgtgcgcagaagcgcccggcc
tacgatgagcgtctggagattgagctcaacgttatcaaccagatggggttcccgggctac
ttcctgatcgtgatggagtttatccagtggtcaaaagataacgggatcccggtcggaccc
ggacgcggttccggtgccggttcactggtggcctatgcgctgaagattaccgacctcgat
ccgctggaatttgacctgctgtttgaacgcttcctgaatccggaacgtgtctccatgccc
gactttgacgtcgacttctgcatggagaagcgcgatcaggtgatcgatcacgttgccgag
atgtatggccgtgaagcggtttcgcagattatcaccttcggcaccatggcggcgaaagcg
gtgatccgcgatgtagggcgcgtgctgggccatccttatggctttgtcgatcgcatctcc
aagctggtgccgcccgatccgggcatgacgctggaaaaagcgtttcaggctgaaccgcag
ctgcctgagatctatgacgccgatgaagaggtcagggcgctgatcgacatggcgcgcaag
ctggaaggcgtcacgcgaaacgccggcaagcacgctggcggcgtggtcattgcgccgacc
aaaatcaccgattttgccccgctttactgcgatgaaaacggccagttccccgtcacccag
tttgataaaaatgatgtggagtatgccggactggtgaagtttgacttcctcggcctgcgt
acgctgaccatcatcgactgggcgctgaagatgatcaacccgcgccgtgaaaagcagggg
ctgccgccgatcgacattgcggctattccgcttgatgataaaaaaagcttcgatatgctg
cagcgctcagagaccaccgcggtgttccagcttgaatcgcgcggcatgaaagatctgatc
aagcgactgaagcctgactgctttgaagatatgatcgccctggtggcgctgtttcgtccc
ggcccgctgcagtccggcatggtggataactttatcgaccgtaagcatggccgcgaagaa
ctctcctatcctgacatccagtggcagcatgagagtctgaagccggtactggagcctacc
tacggcatcattctctatcaggagcaggtgatgcagatcgcacaggtgctggcgggttat
acgctgggcggcgctgatatgctgcgtcgtgcgatgggtaaaaagaaaccggaagagatg
gcgaagcagcgttcagtgttcaaagagggcgctgaaagcatgggtatcaacggcgaactg
tcgatgaaaatcttcgacctggtagagaagttcgccggctatggttttaacaaatcgcac
tctgcagcctatgcgctggtctcctatcagacgctgtggctgaaagcacactatccggct
gagtttatggctgcggtcatgaccgccgatatggataacaccgagaaagtggtcgggctg
gtggatgagtgctggcgcatgggcctgaaagtgctgccgccggatatcaatgccggcctc
tatccgttccacgttaacgacgacggtgaaattgtctacggcatcggcgcgatcaaaggc
gtcggtgaaggcccgattgaagcgattctcgaagcgcgtaatcagggcggctattttaaa
gagctgttcgatctctgcgcgcgtaccgatacgcgcaaaattaaccgccgggtgatagag
aagctgatcatgtccggcgcgtttgaccggctcggaccccatcgcgcggcgctgatgagc
gccctgagcgatgccctgaaagccgctgaccagcatgctaaagcagaggcgacggggcag
gcagatatgtttggcgtgctggctgaagagccggagcaggtcgaaaaatcgtatgcgtca
attacgccgtggccagagcaggtgcagctggatggcgaacgtgaaacgctggggctctat
cttaccgggcatccgattaatcagtatctgaaagagattgagcgctacgtcggcgggatg
cggctgaaagatatgcatcctactgaacgtggcaaggtcaccatcgctgcggggctggtg
attgctgcccgcgtgatggtgaccaagcgcggcaaccgaattggtatttgtactctggac
gatcgctccggtcgtctggaagtcatgctatttaccgatgcgttagataagtaccagcag
ctgctggagaaagaccgtatcctgatcgtcagcggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgaccgccagggaagtgatggatatcgatgaagcgcgggaaaaatat
gcgcgcggacttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgccagtctctggagcctcatcgttccgggaccattccggtacatctctattatcag
agagcagatgcgcgggcgaagcttcgctttggtgcagcgtggcgtatttcgcccagcgat
cgtttacttaacgacctgcggtcgttagtaggatcggagcaggtggaactggagtttgac
taa
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