Pantoea eucrina: LAC65_05525
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Entry
LAC65_05525 CDS
T07862
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
per
Pantoea eucrina
Brite
KEGG Orthology (KO) [BR:
per00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
per01002
]
LAC65_05525 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
per01011
]
LAC65_05525 (ldtD)
Peptidases and inhibitors [BR:
per01002
]
Cysteine peptidases
Family C82
LAC65_05525 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
per01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LAC65_05525 (ldtD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UBB14280
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All DBs
Position
1189077..1190888
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AA seq
603 aa
AA seq
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MLLSKTFRFNRMALVFSVVLAGLPLAAGQAAQTASMTAGGHGTTSVAASQQQILQAFSAS
DRPFYLPGLAGLYAARGMAPLWQDRDTVQAFQQQLAEVALSGVQPQFSRWVERLTDPDIK
GFARDVVLSDAMLGYLQFVAGVPAQGETWLYGNVPYRLTMPSLSAINQWQNAVNAGGSRA
FVASLQPQHPQYQPMHAALKTLLTDNRPWPQLRDKATLRPGQVSDDVPALREILQRTGML
TASDHATTPAPDEDAVPAGAVPVAESQPVAVSPSATSVTDLPAPTPQPAGNILAGSPSAA
GNIYDTALVEGVKRFQHWQGLADDGAIGPRTREWLNVSPQMRASLLALNIQRLRLLPDDM
HNGIMVNIPNYSLTYYNNGSTVLSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVR
QDIVPKVKQDPGYLYRHGYTLLSGWSADAEVIDPTMINWQMVSAASFPYRIRQAPGATNS
LGRYKFNMPSSDAIYLHDTPNHGLFQRDIRALSSGCVRVNKASDLANLLLQDAGWNDSRI
SSTLKQGDTRYVPIRHRIPVNLYYLTAWVSDDGQAQYRTDIYNYDNTARSGSQVLARAGQ
LLL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgagtaaaacgttcagatttaatcgcatggcgctggtgtttagtgtcgtgctg
gcaggcttgccactggccgcggggcaggctgcacaaaccgccagcatgacagccggcggg
cacggcaccacgtcagtggcggccagccagcagcagatcctgcaggcattcagcgccagc
gatcgccctttttacctgccgggtctggcgggtctttatgccgcgcgcggaatggcgccg
ctctggcaggaccgcgatacggtgcaggcgtttcagcagcagctggctgaggtcgcgctt
tcaggcgtgcagccacagttcagccgctgggttgagcggctgaccgatccggacattaaa
ggctttgcgcgcgacgtggtgctgagcgatgccatgctgggttacctgcagtttgtggcg
ggcgtaccggcgcagggtgaaacctggctttatggcaatgtgccttacaggcttaccatg
ccgtcgctgtcagcaatcaatcagtggcagaacgcggttaacgctggcggcagccgcgcg
tttgtggcctcactgcagccgcagcatccgcagtatcagccgatgcatgcggcgctgaag
acgctgctgacggataatcgtccctggccgcagctgcgtgacaaagcgacgctgcgtccg
gggcaggtcagcgatgatgtgccggcgctgcgggaaattcttcagcgcaccggtatgctg
accgcatctgaccacgccactacgcctgcaccggatgaagatgcagtgccggcgggcgcc
gtgccggttgctgaaagccagccggtggcagtaagtccttccgccaccagcgtcaccgat
cttccggccccgacgccgcagccggcaggaaatatactggccggatcgccttctgcagcc
ggcaatatctatgacactgcgctggttgagggcgtgaagcgctttcagcactggcagggg
ctggcggatgacggcgcaattggcccgcgcacccgcgagtggctcaatgtctccccgcag
atgcgcgcctcactgctggcgctgaacattcagcgtctgcggctgctgccggatgatatg
cataacgggataatggtgaatattcccaactattcgctgacctactataacaacggcagc
acggtgctctcatcgcgggttattgtcggacggcccgatcgcaaaacgccgcttatgcgc
agtgcgctgaacaacgtggtgctcaatccgccgtggaacgtgccaaccacgctggtgcgt
caggatattgtgccgaaggtgaaacaggatcctggttatctctaccggcacggctatacg
ctgctgtcaggctggagcgctgacgctgaagtgatcgacccgacgatgatcaactggcag
atggtttctgctgccagcttcccgtatcgcatccgtcaggcaccgggcgccaccaattca
ttgggacgttataagtttaatatgcccagttcagacgccatctatctgcacgatacgcca
aaccacggcctgtttcagcgcgatattcgcgcactcagctccggctgcgtacgcgtaaat
aaagcctccgatctggctaacctgctgctgcaggatgctggctggaacgacagccgtatt
tccagcacgctgaagcagggtgacacgcgctatgtgccgattcggcatcgtatcccggtc
aatctgtactatctgaccgcctgggtcagcgatgacgggcaggcgcaatatcgtacagat
atttacaattatgataatacggcgcgctccggcagccaggtgctggcccgggcaggacag
ctcctgctgtag
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