Pantoea eucrina: LAC65_08010
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Entry
LAC65_08010 CDS
T07862
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
per
Pantoea eucrina
Brite
KEGG Orthology (KO) [BR:
per00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
per03016
]
LAC65_08010
Enzymes [BR:
per01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LAC65_08010
Transfer RNA biogenesis [BR:
per03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LAC65_08010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
UBB11808
LinkDB
All DBs
Position
1708573..1710507
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKEKLHAQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
TAVIHTDKDRESAEPDTLIEPFLTRFVGRVQKKDDRLAIVPDHPLLKDAIQCRAVRGLTH
DFQNGDWAVAEMRRHPLKGDRGFYAELTEFIVTADDHLAPWWVTLSRHNLEREAPESECG
GMLDEQLTREDLTALNFVTIDSASTQDMDDALYAEAQADGSLLLTIAIADPTAYVAEGSE
LDKLAARRAFTNYLPGFNIPMLPRELSDNICSLRPHEKRPVLACRVTVQPDGALADDVHF
FAAWIESKAKLVYDNVSDWLENSGSWQPENEAIAEQIRLLHRLCLARSEWRQTHALVFKD
RPDFRFLLGEKGEVLDIIAEHRRIANRMVEEAMILANICAANVLQKKLGFGIYNLHTGFD
LANAEQVAGVLAGHGITVDPQAITTLEGFRQMRRELDAQPTQYLDSRIRRFQSFAEIGTE
PGPHFGLGLDAYATWTSPIRKFGDMINHRLLKAIVRGESIARPQSDVTVIMGERRRLNRM
AERDVGDWLYARFLTPFAGSERKFSAEIIDVSRGGMRVRLQENGAVAFIPAPFIHAVRDE
LVCSQESGTVQVQGEVVYRVTDIIDVTIAEVRMETRSVVARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagctgaaagagaagcttcacgcgcagactccg
cgcgccgaaggcgttgtgaaaggcacagaaaaaggctttggcttccttgaagttgatgct
cagaaaagctacttcattccgccaccgcaaatgaagaaagtgatgcacggcgatcgtatc
accgcggtaatccacaccgataaagatcgtgaaagtgcagagccggataccctgattgag
ccgtttctgacgcgcttcgtcggccgggtgcagaaaaaagacgatcgtctcgccatcgtg
ccggatcatccgctgctgaaagatgccattcagtgtcgcgccgtgcgcggtctgacgcac
gatttccagaacggtgactgggctgtggctgaaatgcgtcgccatccgctgaaaggcgat
cgcggcttttatgctgagctgactgaatttatcgttaccgcagacgaccacctggcgccg
tggtgggtcacgctgtcgcgccataacctggagcgcgaagcgccagagagtgaatgcggc
ggaatgctggatgagcagctgacgcgtgaagatctcaccgcgctgaactttgtcaccatc
gacagcgccagtacgcaggatatggacgatgcgctctatgcggaagcgcaggcggatggc
agcctgctgctgaccatcgctattgccgatccgaccgcttacgtagcggaaggcagcgag
cttgataagctggccgcccggcgcgcgtttaccaactaccttcccggctttaacattcct
atgctgccgcgcgagctctccgataatatctgttcgctgcgcccgcatgagaaacgtccg
gtgctcgcctgccgggtgacggtccagccggatggcgcactcgctgacgacgtgcatttc
tttgcagcctggattgaatccaaagccaaactggtttacgacaacgtctcagactggctg
gaaaacagcggcagctggcagccggaaaatgaggcgattgctgagcagatccgtctgctg
catcgtctctgcctggcgcgcagtgaatggcgtcagacccatgcgctggtatttaaagat
cgccccgatttccgcttcctgctgggagagaaaggcgaagtgctggatattatcgctgaa
catcgtcgtatcgctaaccgcatggttgaagaggcgatgattctggccaacatctgcgcg
gcgaacgtgctgcagaaaaaactgggttttggcatctacaacctgcacaccggcttcgat
ctggccaacgctgaacaggtagccggcgtgctggctggtcacggcattaccgtcgatccg
caggccattacgacactggaagggttccgtcagatgcgtcgcgaactcgacgcgcagccg
acacagtatctcgacagccgcattcgccgtttccagagctttgctgagattggcaccgaa
cccggcccgcactttggtctgggtctggatgcctatgcgacgtggacctcaccgatccgt
aagtttggcgatatgatcaaccatcgcctgctgaaagctattgtgcgcggtgagagcatt
gcccgtccgcagagtgacgttacggttattatgggtgagcgtcgtcgccttaaccggatg
gctgagcgcgatgtgggtgactggctttatgcgcgtttcctgacgcctttcgccggcagc
gagcgcaaattcagcgccgagatcattgatgtatcgcgcggcggtatgcgcgtacgcctg
caggagaacggtgcggtggcctttattccggcgccgtttattcatgcggtacgcgatgag
ctggtctgctcgcaggagagcggcacggtgcaggttcaaggtgaagtggtgtatcgcgtc
accgatattattgatgtcaccatcgccgaagtgcgcatggagacccgcagcgtggttgcc
cgcccggcagcctga
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